Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0230 ATGATGAATACAGAAGGTTGCGAGAAGCGAGTGGATACTCGTTATTGGGTACCATTGTTGGTGGAGGCTTGCAAGAACAAAGATCCATTGCAACATTCTTCTAAATGCAATCAAAGCGATAAATTCTTCCCCAGTTTCTGCATTACCTGCTCACAATTATTCTGCAGATTCTGCCCTAAAGGAACCAACCGCCCCCATGATCACCACACAGTACTCCCAGTTTACAAATGTTCTCGCGATAATTGTTTGCATGAAAGTCAGGTGTCCAAGTTCATTGATATATCAGACATAGACGTATACAGTATTAATCATAAACAGGTAGTTTTCGTTAACAGAAGACATTGTGAACAACCCAAGTGTCGGACTAATAAATCTGGCTACGCGTGCAACATCTGTGGAAGAGAACTCATTAGAGAAACTAAGTTCTGCTCAGTCCAGTGCAAGATCGAAAGTGGTAAGGATTTAGAGCTGAAACTGAAACGGAAAGCTGATGAAGGAGAAGAGCCTGCCGCCTTAAAGCCTCAGTCTTATCGGAAAAGGAGCAGAAAAGGGGTGCCCACCCGGTCCATCTTAATTAGTCCTTTGATTCCTCCTTTCCACTACATTGTTAATTAA 615 0.4228 MMNTEGCEKRVDTRYWVPLLVEACKNKDPLQHSSKCNQSDKFFPSFCITCSQLFCRFCPKGTNRPHDHHTVLPVYKCSRDNCLHESQVSKFIDISDIDVYSINHKQVVFVNRRHCEQPKCRTNKSGYACNICGRELIRETKFCSVQCKIESGKDLELKLKRKADEGEEPAALKPQSYRKRSRKGVPTRSILISPLIPPFHYIVN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0230 204 ProSiteProfiles Zinc finger B-box type profile. 31 74 IPR000315 GO:0008270
Lele52g0230 204 Pfam PLATZ transcription factor 78 149 IPR006734 -
Lele52g0230 204 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 14 175 - -
Lele52g0230 204 SUPERFAMILY B-box zinc-binding domain 33 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0230 Lele-ChrLele52 1379463 1380253 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele52g0230 PLATZ 8e-13 No_clan