Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0223 ATGGGAATAGCAGCACCGCCACTTGCATCAATAATCTCCCACTCCAAGTCCAAGACGACCCACCATTCCTTTTTTACCTTCGACAATAAGTCCGATTTTTCCAATTCTATGTCCATGTCCCAGGATTATCATCAAGCGGGAATCTTCAGCTTCTCGAATGGATTCGTGAGATCCACTGTAACTCAGCAACCTCATCAGCAGCCGCAGATCAGGAGGGACAAAGTGAGGGTGCAAGGCTTCGACCCGCCACCGCCGTTAGTGGGTATTGAGGAAGAGGAATCCGGAGGCCTTCCCGTGTACGAAACCGCCGGGATGTTATCGGAGATGTTTAGTTTCCCTCCCACAGGCGCCACCTCTACTGAATTGTTGGAACAACAACCCTTGACGGAGACGTATCGACCCTTCAGCAGGCCACAGCAGGCTACTGCGATGGTCAGTGAGTGGTACGGAGACCAACAAGGCATGGTAAGTGGTTTGGGAGATTCGAAGAATAGCCACCACCACCACCGTCCTCATCAGCGTCAGATTTCAAGCATGAATGCGGCGGACTCAGCGGCTGCCATGCAGCTTTTTCTCATGAACCCTCAAACCAGATCGCCTTCCCCTCCTCACAATCCTTCCACTAGTTCTTCTACCCTCAACATGTTGCTCCCCAATCCTTCCTCTTCCCTGCAAGAATTCCCAGCAGGCCCCGCAACGGGAGGAGCTTTTGGTCAATTCACATGGCTTCCATTTTCTGAAGCAGGTTCTCAAAACGCCAACACCAATCAGAATCCGGTTGAAATCGGAGGGGTTGTGGAAGGCCAAGGTCTTTCTTTATCGTTGTCATCTACATTAGAAGCAGCGAAAGCCGAGGAACTGAGGATGGGAGATAGCGGGTTTCTTAATTATTACAGTCAAAGTGCATCAGGAGGGTCCTCATCTGCTCAGTATCCGTACAAGAATTTGGGGGGAGGTCAAACTCAAACTCACACATTGCATTTACAAGGAGTAGCGCAGAACCGCCAACTCCATGCTGATTTCGGCTCATCGTTAGGGGTTGCAAATGTGCTGAGGAACTCCAAGTATGTGAAGCCTGCTAAAGAATTGCTTGAAGAATTCTGCAGCGTCGGGAGGGGTCAGTTCAAGAAGGACAAATTCACCAGGCAGAACTCCAACCCTAATTCAAATTCAGCTGTTGCCGCCGCCGCTTCTTCATCTTCAACAAAAGATCCTCCTCCTTTGTCAGCCGCCGACAGGATTGAGCATCAGAGAAGGAAGGTCAAGCTCCTATCCATGCTTGACGAGGTGGACCGGAGATACAGTCACTACTGCGAGCAAATGCTGATGGTGGCGAACTCGTTTGACTTGGTGATGGGTTTTGGGGCGGCTGTGCCATACACGGCGCTGGCACAGAAAGCGATGTCAAGGCATTTCCGGTGTCTGAAGGATGCCATATCAGCACAACTGAAGCACACTTGCGAGTTGCTGGGCGAGAAAGATGGTTTGGGTTCGTCGGGTTTGACCAAGGGTGAGACCCCAAGGTTGAAGCTTCTGGAGCAAAGCCTGAGGCAGCAGAGAGCCTTCCACCAGATAGGCATGATGGAGCAGGAGGCTTGGAGACCCCAGCGAGGCCTTCCCGAACGTTCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTCCTCCATCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTGGTCTATCGAGAAATCAGGTATCAAACTGGTTCATTAACGCCAGGGTAAGGTTGTGGAAACCCATGGTAGAGGACATGTATCAACAAGAGCTCAAAGAAGCTGGGGATGAAGAAGAGAGAGAGAACACCAACAATAGTGGCAACATGGCTCAAACTCCCACGCCTACCACCACCACATCAACAGCAACGGCGCCACCCACAACCCCATCCAAAAGATCCGACGTCAGTGCCTCCGAAAGAGACCCCTCGCTCGTTGCAATCAATACACAAGCCCTCTCGGAAAACCAAGCAAAGCAACATTCGTCCACCGCCACCATCATGGCCCCCAGCACCACCGCCTCTGAGGTAGCGCCACCCATGTCCCAGTGTTTCCGATCAGACCTGCCCCTGCACAGTCTCGATGACACGTGTCGGCATGGCAGCATGGTTGCAGAAGACTGCGGGACCGCCTCGGCAACTGCTAACAATATTGGATCTACTCTCATTAGGTTCGGGACCACGGCCGGTGAAGTGTCGCTCACCCTAGGGCTACGCCACGACGGGAACATCCCTGACACTTCTCCTTTCTCTGTTAGAGATTTTGGAGGCATCTGA 2310 0.5208 MGIAAPPLASIISHSKSKTTHHSFFTFDNKSDFSNSMSMSQDYHQAGIFSFSNGFVRSTVTQQPHQQPQIRRDKVRVQGFDPPPPLVGIEEEESGGLPVYETAGMLSEMFSFPPTGATSTELLEQQPLTETYRPFSRPQQATAMVSEWYGDQQGMVSGLGDSKNSHHHHRPHQRQISSMNAADSAAAMQLFLMNPQTRSPSPPHNPSTSSSTLNMLLPNPSSSLQEFPAGPATGGAFGQFTWLPFSEAGSQNANTNQNPVEIGGVVEGQGLSLSLSSTLEAAKAEELRMGDSGFLNYYSQSASGGSSSAQYPYKNLGGGQTQTHTLHLQGVAQNRQLHADFGSSLGVANVLRNSKYVKPAKELLEEFCSVGRGQFKKDKFTRQNSNPNSNSAVAAAASSSSTKDPPPLSAADRIEHQRRKVKLLSMLDEVDRRYSHYCEQMLMVANSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAISAQLKHTCELLGEKDGLGSSGLTKGETPRLKLLEQSLRQQRAFHQIGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAGDEEERENTNNSGNMAQTPTPTTTTSTATAPPTTPSKRSDVSASERDPSLVAINTQALSENQAKQHSSTATIMAPSTTASEVAPPMSQCFRSDLPLHSLDDTCRHGSMVAEDCGTASATANNIGSTLIRFGTTAGEVSLTLGLRHDGNIPDTSPFSVRDFGGI 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0223 769 FunFam BEL1-like homeodomain protein 4 536 598 - -
Lele52g0223 769 MobiDBLite consensus disorder prediction 616 645 - -
Lele52g0223 769 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 185 616 - -
Lele52g0223 769 SMART HOX_1 533 597 IPR001356 GO:0003677
Lele52g0223 769 MobiDBLite consensus disorder prediction 195 230 - -
Lele52g0223 769 CDD homeodomain 533 594 IPR001356 GO:0003677
Lele52g0223 769 Gene3D - 536 598 - -
Lele52g0223 769 SMART prehox3 345 481 IPR006563 -
Lele52g0223 769 MobiDBLite consensus disorder prediction 195 228 - -
Lele52g0223 769 MobiDBLite consensus disorder prediction 380 406 - -
Lele52g0223 769 MobiDBLite consensus disorder prediction 159 180 - -
Lele52g0223 769 Pfam Associated with HOX 350 480 IPR006563 -
Lele52g0223 769 ProSiteProfiles 'Homeobox' domain profile. 530 593 IPR001356 GO:0003677
Lele52g0223 769 MobiDBLite consensus disorder prediction 603 653 - -
Lele52g0223 769 SUPERFAMILY Homeodomain-like 535 600 IPR009057 -
Lele52g0223 769 MobiDBLite consensus disorder prediction 379 414 - -
Lele52g0223 769 Pfam Homeobox KN domain 550 589 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0223 Lele-ChrLele52 1323018 1328485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0223 38 580 Homeobox Transcription Factor Family AT4G36870 51.884 5.70e-146 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele52g0223 POX 1.1e-48 No_clan