Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0203 ATGGGGCCACACTGGAATCCACTGGCAACAGAGATAGCAATGGTGCTGGAAGGGGAAGGCATGGTTCGTGTGGTATGTGGGAACAGCAATATGAACAATTCGGAATGCCAAAACATGAGGTTCAAGGTGAAGCAGGGAGATGTTTTCATGGTTCCTAGGTTTCATCCAATGGCTCAGATGTCTTTCAACAATGACTCTCTGGTTTTTCTGGGGTTTAGCACCACAATGAAGAAGACATATCCACAATTTTTAGTGGGGAAGAGATCGGTGATACACATTATAGACAAGCGCATATTAGCTGCAGTTTTCAATGTGAGTGAGAGAACAATTAAGCAGCTTTTGAAATCTGAGGCAGGATCCATCATATTGGGGTGTCTATCATGCGCCGAGGAAGAGGAAAGGATCATGATAGAAGAAGCCAAAAGGAGGGAAGAGGAAGAAGCAAGAAGGAGAGAGAAGGAGGAAGCAAGGAAGAGAGAAGAGGAGGAAGCAAGGAAGAGAGAAGAAGAGGAAGCCAGGAAAAGAGAAGAGGAAGAAGCAAGGAAGAGAAAAGAAGAGGAAGAAGCAAGGAAGAGAGAAGAGGAAAAAGCAAGAAAGAGAGAAGAGGAGGAGGAAGCAAGGAAAAGAGAGGAGGAAGAGGCAAGAAAGAGAGAAGAAGAGGAAGAAGCAAAAAGGAGAGAGAAGGAGGAAGCCAGAGAGAGGGAGGAGGAGGAGGAAGGCCCAGGAAGTGAGAAGGATGCATCTGTATTAATTGCAAAAGATGAATTAAGAGGGATGCATATACTTGAGGGACACCAAAGGAAGAGGGATGGGTTTAAGGAGGTCTTCATTTTGTTGCTGGGAATTTATAGTGTTGGGATGGGATGGGCAAGACAACAGAGATATGGCCTTTTAGATCTTAACACAACTCTGCTTCCTGAACTTGATGCAAATGAAGTATTACCGTGCCATCTATGA 957 0.4472 MGPHWNPLATEIAMVLEGEGMVRVVCGNSNMNNSECQNMRFKVKQGDVFMVPRFHPMAQMSFNNDSLVFLGFSTTMKKTYPQFLVGKRSVIHIIDKRILAAVFNVSERTIKQLLKSEAGSIILGCLSCAEEEERIMIEEAKRREEEEARRREKEEARKREEEEARKREEEEARKREEEEARKRKEEEEARKREEEKARKREEEEEARKREEEEARKREEEEEAKRREKEEAREREEEEEGPGSEKDASVLIAKDELRGMHILEGHQRKRDGFKEVFILLLGIYSVGMGWARQQRYGLLDLNTTLLPELDANEVLPCHL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0203 318 SUPERFAMILY RmlC-like cupins 2 123 IPR011051 -
Lele52g0203 318 PANTHER OS03G0336100 PROTEIN-RELATED 1 128 - -
Lele52g0203 318 Gene3D Jelly Rolls 1 138 IPR014710 -
Lele52g0203 318 CDD cupin_7S_vicilin-like_C 1 116 - -
Lele52g0203 318 Pfam Cupin 1 110 IPR006045 -
Lele52g0203 318 SMART Cupin_1_3 1 111 IPR006045 -
Lele52g0203 318 MobiDBLite consensus disorder prediction 141 249 - -
Lele52g0203 318 Coils Coil 128 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0203 Lele-ChrLele52 1207015 1208161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0203 1 151 Miscellaneous Gene Families AT4G36700 53.595 1.76e-47 165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0203 52 1207015 1208161 Lele53g0065 53 507987 510883 CCT
Lele52g0203 52 1207015 1208161 Lele54g0067 54 549235 552359 CCT
Lele52g0203 52 1207015 1208161 Lele55g1432 55 20557656 20560563 CCT
Lele52g0203 52 1207015 1208161 Lele56g1364 56 16800036 16802914 CCT
Lele49g0185 49 1112318 1114949 Lele52g0203 52 1207015 1208161 hybridization
Lele50g0201 50 1184881 1186986 Lele52g0203 52 1207015 1208161 hybridization