Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0200 ATGCCCATTGGCAGTAAGTGGTATAATAATTATTTTACTGGAGAATGTGCCCTGTCATCATCTAGTGTGATATCAACTTTGTATAGCTTTCAACTTGTGTCATCATCTAGTGTGATAGGGAGTGGCAATGGAGGCGATCTACCTAGCTATGGTGAGGTTTATGCGATGCCTGTTGCCCCGGGAGATGTTGTCATTGCTGGAACTGATGGACTATTTGACAACTTGTACTACAATGAGATTACTGCGATTGTTTTAGAGGCAGTAAGGGACAGACTAGAACCCCAAATAGCTGCTCAGAAGATAGCAGCACTAGCTCGGCATAGGGCACTGGACCGGAATCGGCAGGCACCATTTTCGGTTGCTGCTAAAGAGGCTGGGTTCCGCTATCATGGTGGCAAGCTTGACGACATTACAGTTGTTGTATCGTACATAACAGAGATCAATTAG 447 0.4519 MPIGSKWYNNYFTGECALSSSSVISTLYSFQLVSSSSVIGSGNGGDLPSYGEVYAMPVAPGDVVIAGTDGLFDNLYYNEITAIVLEAVRDRLEPQIAAQKIAALARHRALDRNRQAPFSVAAKEAGFRYHGGKLDDITVVVSYITEIN 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0200 148 Gene3D - 47 147 IPR036457 -
Lele52g0200 148 PANTHER PROTEIN PHOSPHATASE 2C 28 146 IPR039123 -
Lele52g0200 148 SUPERFAMILY PP2C-like 53 143 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0200 Lele-ChrLele52 1194294 1200120 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0068 53 527291 528737 Lele52g0200 52 1194294 1200120 CCT
Lele54g0069 54 567751 569204 Lele52g0200 52 1194294 1200120 CCT
Lele55g1429 55 20539376 20540845 Lele52g0200 52 1194294 1200120 CCT
Lele56g1362 56 16778111 16779582 Lele52g0200 52 1194294 1200120 CCT
Lele49g0183 49 1105729 1110925 Lele52g0200 52 1194294 1200120 hybridization