Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0196 ATGGGTCAGCTCTACTATTATATAAGAGGAATCTCACCTTTTCACAAGCAAACGATTCTGAAAGAAGCTGAGAAGAGAAAAATGGCGAAGCGTTTCAAGTTTCGAATCTGCCATGTCTTTCAGTCTTGCCGATCCAAAGACCCTTCCACGCTTCCCTCCAACCCTGTCCCTTGCTCCCTCCCACTCGCTCCCTCTAAACCCCATCGCTCCTCCCTCCGCCGCCACGTCTCATATGCCTGTGGCTTCAGTTCAAGACCCACCCTCTCCGACGCCGATCACCACCGCAACGAACCTCAGGATTTCAACTGGGAACAGCAAGACAAATGGCACGTCGTCGCCAAGGTCTGCGCCCCCGACAACAACACCACACCTCGCCGCAAAATCTACAGCTCCTCAGTCTCCGCTGCCTCCGACGACGACGACGACGCCTCGCCTCTCCCACCGGCGCCTCGCGTGAGGAAGAAGAAAGGACGGGTTAAGAAGAAGAAAACGACCCCGAGGTTTCGTATGAGCACCTCCTCCGTGGACAGCTGTGGATTGTTCAGCAGCGATGGCTACGACGACATGGACGAAGAAGAAACAGAAACCCTAGTTTCGTCTTCTAGAAGCTTCTCCACGGACTCTTCTTCCGTCGAGTTGAACTCTCACTTGGAGAGCATTTGCGAGACGCCAAATCAGCACCAGGGAGTTAAGAAGATCAAGCCAAACTCAAAGAAGAAGAAGAAGAAGAAGAGTAAGAAAAAGAAAGATGGAAGAGTGAGCTTGTCATCGTCGCCGGCGAGGTTGTCGATATTATTGCGGCTGGTACCATGCAGCGTGGAGGGGAAGGTGAGGGAGAGCTTTGCGGTGGTGAAGAGATCGGAGGATCCTTACGAGGATTTCAGGAGGTCGATGATGGAGATGATTTTGGAGAAGCAGATTTTCGAGGACACGGATTTGGAGCAGCTCTTACATTGCTTCTTGTCTCTTAATTCAAGCGAACACCATGAAGTTATTCTCCAGGTTTTCGCTGAGATTTGGCAGTCTTTGTTCACTACTTCTGCGCCAACAGTAACATTTAGAGAATGA 1068 0.5112 MGQLYYYIRGISPFHKQTILKEAEKRKMAKRFKFRICHVFQSCRSKDPSTLPSNPVPCSLPLAPSKPHRSSLRRHVSYACGFSSRPTLSDADHHRNEPQDFNWEQQDKWHVVAKVCAPDNNTTPRRKIYSSSVSAASDDDDDASPLPPAPRVRKKKGRVKKKKTTPRFRMSTSSVDSCGLFSSDGYDDMDEEETETLVSSSRSFSTDSSSVELNSHLESICETPNQHQGVKKIKPNSKKKKKKKSKKKKDGRVSLSSSPARLSILLRLVPCSVEGKVRESFAVVKRSEDPYEDFRRSMMEMILEKQIFEDTDLEQLLHCFLSLNSSEHHEVILQVFAEIWQSLFTTSAPTVTFRE 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0196 355 MobiDBLite consensus disorder prediction 232 250 - -
Lele52g0196 355 MobiDBLite consensus disorder prediction 187 256 - -
Lele52g0196 355 MobiDBLite consensus disorder prediction 120 174 - -
Lele52g0196 355 Pfam Transcriptional repressor, ovate 287 344 IPR006458 -
Lele52g0196 355 MobiDBLite consensus disorder prediction 123 138 - -
Lele52g0196 355 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 281 344 IPR006458 -
Lele52g0196 355 MobiDBLite consensus disorder prediction 198 231 - -
Lele52g0196 355 MobiDBLite consensus disorder prediction 151 167 - -
Lele52g0196 355 ProSiteProfiles OVATE domain profile. 283 342 IPR006458 -
Lele52g0196 355 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 121 345 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0196 Lele-ChrLele52 1162011 1163078 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele52g0196 Ovate 2.8e-25 No_clan