Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0183 ATGTGGCGGCGCGTTGCTCGTGGTCTTCGTGTACCAGCTTCCGACAGATCGATTCCTACTGACTCTCTTCGATCTCACATTTCTGGATTTTTCTCCGCTGGAGGGAACTCCTCGTACACTGTGGTGGATCATACTTATGATGCAATCGTTGTAGACGCTGGGGGTGCAGGGTTGAGAGCTGCTATTGGACTCTCGGAACGTGGGTTCAATACTGCTTGCATTACTAAGCTTTTCCCAACTCGTTCACATACTGTTGCAGCTCAGATTCTACATTTTGCTGTAACAGGCTTGTTTGTCTTGTTTGTCTTGTTTATCCCATTTCTGTCCTGGGGTGGTATAAATGCTGCGCTGGCAAATATGTCCGAGGATGACTGGAGGTGGCACATGTATGACACAGTCAAGGGAAGTGACTGGCTAGGAGATCAAGATGCCATCCAATATATGTGCAGAGAGGCCCCAAAAGCTGTCATTGAGCTTGAGAATTATGGATTGCCATTTTCCCGAACTGAGGATGGAAAAATATACCAGCGTGCATTTGGTGGTCAAAGCCTGAACTTTGGAAAAGGTAGGCAGGCATACCGTTGTGCATGTGCTGCTGATCGAACTGGACATGCTTTATTGCACACTCTATGGCCAGGGTTTACCTCCTATCTTGTCCAGGCGCTTATACGTCTTCCGTCGCGTCTCCTGCGATTTCCAGATCTTGTTCGTGTATCTAGAAGTTATCTATTCTACACGCTGGATCCGGACGGATCAGATTGA 762 0.4777 MWRRVARGLRVPASDRSIPTDSLRSHISGFFSAGGNSSYTVVDHTYDAIVVDAGGAGLRAAIGLSERGFNTACITKLFPTRSHTVAAQILHFAVTGLFVLFVLFIPFLSWGGINAALANMSEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLNFGKGRQAYRCACAADRTGHALLHTLWPGFTSYLVQALIRLPSRLLRFPDLVRVSRSYLFYTLDPDGSD 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0183 253 Gene3D - 106 225 IPR036188 -
Lele52g0183 253 Gene3D - 31 98 IPR036188 -
Lele52g0183 253 PANTHER SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT 35 217 IPR030664 -
Lele52g0183 253 SUPERFAMILY FAD/NAD(P)-binding domain 39 196 IPR036188 -
Lele52g0183 253 Pfam FAD binding domain 47 88 IPR003953 -
Lele52g0183 253 Pfam FAD binding domain 108 224 IPR003953 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0183 Lele-ChrLele52 1087204 1091160 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0166 49 999457 1012715 Lele52g0183 52 1087204 1091160 hybridization
Lele50g0185 50 1077365 1086694 Lele52g0183 52 1087204 1091160 hybridization