Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0162 ATGGCCGAGAAATGCAAGATCCTGACCATTGGAGCCACAGGGTACATCGGCAAATTCTTAGTTGAAGCAAGCACAAAAGCAGGACACACCACGTTCGCTTTGGTTAGAGAAAGCACTGTCTCTAATCCAAACATGTCAACGTTGATTGATAACTTCAAGAACTCAGGGGTTATCCTGCTTTATGGTGATCTAATAGGGGGACACCAGGTGGCTGATCAGGCGAACATCATAGCAGCAATAAAAGAAGCTGGAAACATCAAGAGGTTTTTACCATCAGAATTTGGGCTAGATGTGGATCGTCACAGTGCAGTGGAGGCAGCAGCCAGCTTCTTCGAGCAGAAAGCGAAAATCCGAAGGGCGATTGAGGCTGAAAGGATTCCCTACACTTACGTCTCTTGCAATGGTTTTGCTGGATACTTCTTACCCACTTTAGGACAGCTAAATGCCACAGCTCCTCCTCGGGACAAGGTTGTCGTTCAAGGGGATGGAAATGTCAAAGGACTTTATGTGACGGAAGAGGACGTCGCGAGTTACGCCACCAAATCAGTGGACGATCCGAGAACCTTGAACAAAACTCTGTACTTTCGACCACCTGCGAATGTTTTGACCTTCAACGAGATCATCTCACTGTGGGAGAACAAGGTCGGCCATTCCCTTGAGAAAACTTACGTTCCTGAGGATCAACTTCTGAAGAACATCCAGGTGAAGCTGATGTTGGCGATATGTCACTCGATGCTGGTGAAGGGAGACAACACAAAGTTTGAGATTGAGGCATCCTTTGGAAAAGTAAAACTCATCGCTGAGAAAAGCAAGATTCTGATTATCGGAGGCACCGGCTACATCGGAAAATTCATCGTCCAGGCCAGCGCAAAAGCAGGACACCCCACTTTCGTGCTCATCAGGGAAAGCACTCTCTCTAATCTCGACAAGGCCACGCTCGTCGAGAGCTTCAAGAGTTCTGGCATCACCATCCTCCATGGTGACCTCTACGATCACGAGAGTCTGGTTAATGCAATCAAGCAAGTCGACGTTGTCATCTCCACACTGAGTTTTCAGACGGCCGATCAATTGAAAATCCTCGCTGCCATTAAAGAAGCCGGAAACAAAATCAAGAGGTTCATTCCCTCAGAGTTTGGGCTAGATGTGGATCGTCACCATGTAGCTGAGCCAGCTGGTAGTGTTTTGAATCGCAAAGAGGACATCAGAAGGAAAGTTGAAGCCGAAGGGATACCCTACACTTATGTGGTAAGCAACGCCTTCGCTGGCTATTTCTTGCCATTTTGCCAACTATGGGACAGCAGAACGTCACTGCTCCTCCTCAGGACAAGGTTTCCATCATGGGAGATGGTAATGTCAAAGGTAATTAACACCCCAACACAGCATCTTATTTCTACACAAAACAAAACTGTATCATTAATCACAAGGAATCCAATCCTTGTGTCATTTACAGCAATCTACGTGACAGAGGAGGACATTGGGACATACACTATAAAAGCAGTGGAAGACCCAAGAACGTTGAACAAAACCCTCTACCTCAGACCTCCTGCCAACACTCTGACGTTCAACGAGCTTGTCTCGTTGTGGGAGAAGAAGACAGGAAAGGCCCTGGAAAGGAGCCACATTCCAGGGGATGAGATTCTGAAGAAAATCCCAGAGAGTCCTATTCCTATTAACTACATGTTGGGGTTGGGTCATTCAATGCACGTGGAAGGAGACTGCACCAACTATGAGATCGATCCATCCATTGGAGTGGAAGCTACAGAGCTTTACCCAGATGTTCAATACACCAGCGTTGACCACTATTTGAACAAGTTTGTGTGA 1821 0.4684 MAEKCKILTIGATGYIGKFLVEASTKAGHTTFALVRESTVSNPNMSTLIDNFKNSGVILLYGDLIGGHQVADQANIIAAIKEAGNIKRFLPSEFGLDVDRHSAVEAAASFFEQKAKIRRAIEAERIPYTYVSCNGFAGYFLPTLGQLNATAPPRDKVVVQGDGNVKGLYVTEEDVASYATKSVDDPRTLNKTLYFRPPANVLTFNEIISLWENKVGHSLEKTYVPEDQLLKNIQVKLMLAICHSMLVKGDNTKFEIEASFGKVKLIAEKSKILIIGGTGYIGKFIVQASAKAGHPTFVLIRESTLSNLDKATLVESFKSSGITILHGDLYDHESLVNAIKQVDVVISTLSFQTADQLKILAAIKEAGNKIKRFIPSEFGLDVDRHHVAEPAGSVLNRKEDIRRKVEAEGIPYTYVVSNAFAGYFLPFCQLWDSRTSLLLLRTRFPSWEMVMSKVINTPTQHLISTQNKTVSLITRNPILVSFTAIYVTEEDIGTYTIKAVEDPRTLNKTLYLRPPANTLTFNELVSLWEKKTGKALERSHIPGDEILKKIPESPIPINYMLGLGHSMHVEGDCTNYEIDPSIGVEATELYPDVQYTSVDHYLNKFV 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0162 606 CDD PCBER_SDR_a 6 237 IPR045312 GO:0016491
Lele52g0162 606 CDD PCBER_SDR_a 271 601 IPR045312 GO:0016491
Lele52g0162 606 Gene3D - 419 602 - -
Lele52g0162 606 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 269 561 IPR036291 -
Lele52g0162 606 Pfam NmrA-like family 67 218 IPR008030 -
Lele52g0162 606 Pfam NmrA-like family 464 557 IPR008030 -
Lele52g0162 606 Pfam NmrA-like family 7 64 IPR008030 -
Lele52g0162 606 Pfam NmrA-like family 272 428 IPR008030 -
Lele52g0162 606 Gene3D - 6 261 - -
Lele52g0162 606 Gene3D - 133 254 - -
Lele52g0162 606 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 237 IPR036291 -
Lele52g0162 606 PANTHER PINORESINOL REDUCTASE-RELATED 268 606 - -
Lele52g0162 606 Gene3D - 271 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0162 Lele-ChrLele52 970200 975103 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0143 49 875178 880248 Lele52g0162 52 970200 975103 hybridization
Lele50g0164 50 973357 974413 Lele52g0162 52 970200 975103 hybridization