Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0161 ATGGAGAATTCTCCGCCGAATGGAAAGTTTCCTCCTCGGACTCCGAATTCCAGATTCTCGGCTAAGGAGGGAAGAAGTGGGTACGACCCATCAGACACAGAGACAGAGTGGCAAGAAGTTCCCCGACATGAACGAGAGAGAAAGAATCTGACTTTGGGACCTGAAGAAGCTAAAGTCCTCAACTTCAGGAATAATAAAAGTCCCATGGCACTACACAGAAGGCATCCTTCAAAATTTGAACTCGAAATCTCATCTCCTGCTCCGTCTTCAGTGGCAAGCTCAGCACGAAGGAGACCCCAAAGTAGATCGCCGTACAGGCCCTTCAGAGCCGACGGTGAGGCTCTACATCCCATACCAGGTTTGACAAATCCTGACCTTGGAAGGCATGCATCTCCGTATCAACCTGAAAGAGAAAATCTCAATTGGAGAGCAATGAACAGAGTAGGCGAGAAACCATACCAGAGGAGAGCAATGACTGCTCCAAGGCAAAGGGGAAGAGAAAGGGAAACATCCCACGGGATCAATCCTTCAATAGGAGAGATCAACGAGAAGGTTGCTGAGGCGAATTTTTCAAGAGATCCTGTTAATGACGAGCTCATAATAACGAGTACAGAGTCGAGTTTAGCGGGTGATATTTTCTTTTCTCGTGAATACAATGCCATGATGAAACAGAAGACCTTGTTAACAAAACCAAACATTGATGTTGAAACCCAGTTTAATAGCTCGAAGCCTAAGGTCCTTCCCCCAATGGGCACCCCTTATCATCATCATCATCATCCAAACAGAGGAAATGGTCATCTCAATAATGTGAACATACGAGGTACATCATCTAGTAATACTATGCTGTCTCGATCAAGTACGATTTCTAGTAGTGCTGCTAAAAGCAAAAAGAATAGTGGGAATTTAAGCTCTAGCAGTAGTGTGAAGAGTGATGTTAGTTGGACAAGTGCGAGCATTCAGAGATTCATAATGAACAGGAAAAAGAACCACGCAGACGCATGGTTTGCTTGCATGAGAAAAGTAGGCAGGACATCGAATAAATCGCCAGAACATCGATCGGTTGATGAGGCTTCTATAATTGAGAAAGCTTTCGTTCTCCAAAGCCTCCCACAATTCTGGGCAGATAAGCATCAACCCACCTCACTCGATGGCTTCATTTGCCACCAACAAGAAGCCCAGTTTCTCAAGGAATTGGCGTCTCAAGACGTGTGTCCTCATATTCTGCTTAAAGGACCAATTGGTTCAGGAAAAAGAGCGCTATCAATGGCTCTTCTGCGAGAAATATTCGGTGACGCAGCCTCCAATCTATCTCATGATTTAAGAAATTTCACCATCCAGGAAAGGAGGCCCGTGAAAATCACTGTTCCGATAACGTCCAGTTCTCATCACATGGAGCTCAATGTAAATTTGGAACCTAATGCTAAATATGCTTTAATGGGATTAGTTAAGGAAATAAGCACCGAATATGCGATTACACCTGAAGTCAGTAAATTCAATTTCAAGTCAGATTACAAAGTATTAGTTCTTTACGAGGTTGACAAAGCGGCTGACAACATCCAACACATGATCAAATGGATCATAGATCGCTATTCTGATGTATGCAAACTCATAGTTTGTTGCGAAGATGATGCCGACATTCTCGAACCTGTGAAAAACCGGTTCAAAGTGATTAATATTGATGCTCCACCAACTCATGAAATTATGGATGTTCTTATTCAGATAGCGAAACAAGAAGAAATTGATATGTCCATGAACTTTGCTGCTAAGATTGCCACCAAGTCAAAGCAGAATCTCAGGAAAGCAATCATGGCTCTCGAAGCATGCAGAGCACACAACTATCCATTCTCAGAAGAACAACCAATTCCGCTTGGATGGGAGGAGACTATAATAGAAGTTTCTGCAGAGATCCTAGCCGATCCTTCACATTCACGATTATTCTCAATCAGAGGGAAATTACAGAAGCTTCTGGTGGATTTTGTTCAACCCAAGCTGATTCTCCGGAAACTGGTGGAACAGCTCCTAAAAGGAATTGACAGCAACTTAAAAAGGGAGCTCTTCTACTGGCATGCTTATTATAACAAGAGACTCCCACCAGGAACTACAGCTTTACTAAAATTAGAAGAATTTGTGGCCAAGTTCATGAGCATATACAGAAAAAGCTCTAGCGGTCGACAGTTTGTGTAG 2184 0.4309 MENSPPNGKFPPRTPNSRFSAKEGRSGYDPSDTETEWQEVPRHERERKNLTLGPEEAKVLNFRNNKSPMALHRRHPSKFELEISSPAPSSVASSARRRPQSRSPYRPFRADGEALHPIPGLTNPDLGRHASPYQPERENLNWRAMNRVGEKPYQRRAMTAPRQRGRERETSHGINPSIGEINEKVAEANFSRDPVNDELIITSTESSLAGDIFFSREYNAMMKQKTLLTKPNIDVETQFNSSKPKVLPPMGTPYHHHHHPNRGNGHLNNVNIRGTSSSNTMLSRSSTISSSAAKSKKNSGNLSSSSSVKSDVSWTSASIQRFIMNRKKNHADAWFACMRKVGRTSNKSPEHRSVDEASIIEKAFVLQSLPQFWADKHQPTSLDGFICHQQEAQFLKELASQDVCPHILLKGPIGSGKRALSMALLREIFGDAASNLSHDLRNFTIQERRPVKITVPITSSSHHMELNVNLEPNAKYALMGLVKEISTEYAITPEVSKFNFKSDYKVLVLYEVDKAADNIQHMIKWIIDRYSDVCKLIVCCEDDADILEPVKNRFKVINIDAPPTHEIMDVLIQIAKQEEIDMSMNFAAKIATKSKQNLRKAIMALEACRAHNYPFSEEQPIPLGWEETIIEVSAEILADPSHSRLFSIRGKLQKLLVDFVQPKLILRKLVEQLLKGIDSNLKRELFYWHAYYNKRLPPGTTALLKLEEFVAKFMSIYRKSSSGRQFV 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0161 727 MobiDBLite consensus disorder prediction 154 176 - -
Lele52g0161 727 Gene3D - 624 717 - -
Lele52g0161 727 FunFam Replication factor C subunit 3 371 562 - -
Lele52g0161 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 610 IPR027417 -
Lele52g0161 727 MobiDBLite consensus disorder prediction 240 308 - -
Lele52g0161 727 FunFam replication factor C subunit 3 563 621 - -
Lele52g0161 727 CDD AAA 389 444 - -
Lele52g0161 727 MobiDBLite consensus disorder prediction 25 53 - -
Lele52g0161 727 MobiDBLite consensus disorder prediction 264 308 - -
Lele52g0161 727 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 369 706 - -
Lele52g0161 727 MobiDBLite consensus disorder prediction 83 100 - -
Lele52g0161 727 Gene3D - 564 621 - -
Lele52g0161 727 MobiDBLite consensus disorder prediction 1 134 - -
Lele52g0161 727 SUPERFAMILY post-AAA+ oligomerization domain-like 623 717 IPR008921 GO:0003677|GO:0006260
Lele52g0161 727 Gene3D - 371 562 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0161 Lele-ChrLele52 965538 968708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0161 372 718 Core DNA Replication Machinery Family AT5G27740 40.974 6.34e-87 276