Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0150 ATGGCCTTCTTCTCTTCCTCTTCCGCTGACACCAGCCTTTCAACCGTCAAGATGTTCGTTTCAACGGCTGCCTCCGTTGCTGCCATCTCAATGCTTGTCCGATCAGTGGCTCGGGACCTCTTGCCCCAGGATATTCAGGACTATTTCTTTAGCGGTATCCGTGGAATTTTCCATCGCTTTTCTTCTCAACTCACCATGGTGATCGATGAGTTTGATGGTCTCGTTAGCAACCAAATCTACGACCATGCACATACTTATTTAGGCAAAAAAATCTCCCCCTCCACCCGTAGAGTCAAAGTTAGCAAGCCCGATGTTGAGAAGGGCTTCGCAATCACCGTGGAACGCGACGAGGTCATCGTGGACGTGTTCAATGGCGTCAAATTCAAATGGGTCTTTATATGCAGCGAGGTTGAGTCCACAAGTTTCCACAATCCCAGAGACCTAAATTCGACACTGCGATCTGAAGTCCGATCATTGGAGCTGAGTTTCCACAAGAAGCACAAGGAGTTGGTATTAACATCGTACCTTCCCTTCATTATACAAGAAGCGAAATTAATGAAGCAAGAAGCAAGAGCCTTGAGGATCTTTACCGTGGATTATGAGAGCATGTACGGGAATCTGAACGACGCGTGGATACCAACAAACTTGGACCATCCGACAACATTCCAGACACTGGCATTGAACCCAGACATCAAGAAATTCGTTTTGGAGGATCTAGAGAGGTTTGTGAGGAGGAAAGAGTATTATAGGAAGGTAGGTAAGGCATGGAAGAGAGGGTATTTGCTACATGGCCCACCTGGAACAGGGAAATCGAGCTTGATTGCGGCAATGGCGAATTACTTGCATTTTGACATATACGATTTGGAGTTGACGGAACTACGATGCAATTCAGAGCTTCGGCGGTTACTGATTGCTATGGCGAATCGTTCCATTCTTGTTGTGGAAGACATTGATTGCACCATTGAATTCCAGGATCGCATGTCAGAATCAATGGCCGCTTCACAACCGCAGGTGACGCTGTCGGGACTACTGAACTTCATTGATGGGTTGTGGTCAAGTTGTGGGGACGAGAGGATTATAGTGTTCACAACCAACCACAGAGAGAAGCTTGACCCTGCCTTATTGCGTCCTGGTCGTATGGACGTTCACATTCACTTGTCATATTGTACTCCCTCCGTGTTCAGGCAACTTGCTTTTAATTACCTTGAGCTTCAGCAACACCCTCTTTTCCCACAAATCGAAGAAGCCATTCTTGCCACCCACGTCACTCCTGCTGAAGTGGCTGAGCAGCTCTTAAAGACGAAGAGTAGCAGTGATGGTCATCACTTGACTCTTCAAGACCTTCAGCAATTTCTTGCACGGAAAAAGATCGAAAACCAAGAGCTTGAGGCCAAAAAGAGGGAAACGGAACTTGTATCTGATGATAAAAAGCAACCAGCTGATGATGGCGACAAACTAGTGGATAAGGACCACAAAGAAAGTGATGTAGCAGTTCAGCAAACAGTTTAA 1509 0.4645 MAFFSSSSADTSLSTVKMFVSTAASVAAISMLVRSVARDLLPQDIQDYFFSGIRGIFHRFSSQLTMVIDEFDGLVSNQIYDHAHTYLGKKISPSTRRVKVSKPDVEKGFAITVERDEVIVDVFNGVKFKWVFICSEVESTSFHNPRDLNSTLRSEVRSLELSFHKKHKELVLTSYLPFIIQEAKLMKQEARALRIFTVDYESMYGNLNDAWIPTNLDHPTTFQTLALNPDIKKFVLEDLERFVRRKEYYRKVGKAWKRGYLLHGPPGTGKSSLIAAMANYLHFDIYDLELTELRCNSELRRLLIAMANRSILVVEDIDCTIEFQDRMSESMAASQPQVTLSGLLNFIDGLWSSCGDERIIVFTTNHREKLDPALLRPGRMDVHIHLSYCTPSVFRQLAFNYLELQQHPLFPQIEEAILATHVTPAEVAEQLLKTKSSSDGHHLTLQDLQQFLARKKIENQELEAKKRETELVSDDKKQPADDGDKLVDKDHKESDVAVQQTV 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0150 502 ProSitePatterns AAA-protein family signature. 358 376 IPR003960 GO:0005524|GO:0016887
Lele52g0150 502 Pfam Domain associated at C-terminal with AAA 41 133 IPR025753 -
Lele52g0150 502 Gene3D - 385 462 - -
Lele52g0150 502 Coils Coil 445 472 - -
Lele52g0150 502 SMART AAA_5 256 390 IPR003593 -
Lele52g0150 502 PANTHER BCS1 AAA-TYPE ATPASE 21 459 - -
Lele52g0150 502 CDD AAA 257 388 - -
Lele52g0150 502 MobiDBLite consensus disorder prediction 463 496 - -
Lele52g0150 502 MobiDBLite consensus disorder prediction 463 502 - -
Lele52g0150 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 433 IPR027417 -
Lele52g0150 502 Pfam ATPase family associated with various cellular activities (AAA) 261 387 IPR003959 GO:0005524|GO:0016887
Lele52g0150 502 Gene3D - 212 384 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0150 Lele-ChrLele52 904122 905901 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0150 258 421 Calmodulin-binding Proteins AT3G56690 27.168 2.49e-12 67.8