Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0148 ATGGAGCATAGGGATTTCCACCTTCAGCGGCATCAGCTCCAACAAGAATATGCTCCCTACTATAATCCATCCTTTACTTATGAGGCTTGGAACTCCAGCAATTTATGTCCGTTTACCACTGAAAGCGGTCAAAGCACTGAAATAAATTTAAGAGATAAAGGGAAAGAATATGATCTGGATCCTCAACGCTCATCGGGTGAGGATATGCTTACGAAAGACGAGGGGTCCGTGTCTGATAATATTTATCTTCCCAGTTCTTGTGCGAATGATTCATCAATCAGCGAACATTCGGATCATGTAACTGGAAAAGAGATTTGGCCTGCAGGGATAGCCCTAACCAATAAGACGACGTCGTACAACACCTTAGGTGCTGCATCTTCATCGTCAAGCTCCACCTTATCAACCCTAGAGAGGCCTCCTCCTTTATTACTGTCATGCTCTCTGGGCTTAACTTCACAAATGTTGCTGGGCGGCAGTTCTTGTGGTGACCTTCGTCTTTCCTACGATTCTTTTGGTCTCGATGACATGCAACAACGAGAAAATAGTCCATCCAACAGCTCAAATAAAATTTCAGAATTCGTAAGTAGAAGTGGAGTTGGACGGGCAAAAAGGTCTGGCAGTTGGTCTCAATTGAAGGAATATGAAGGAAGAGCAAAGAAGTCAAGAACTTCATGCCCTACCTTGAAGGTCACAAAGGAAAAGGTGGGGGACAGGATTCAGACCCTTCAGAGGTTAGTGGCACCTTTTGGGAAGACCAATACTGCCTCCGTATTGAATGAAACAATAGGCTACATCCACTTCCTTCATGACCAAATTCAGACTTTGAGCATCCCTTATATGAAGTCGTGGAAAACAAAGCCCTTCGGAACGGTGCAGTTGGATTCTAGAGAGGAAAATGGCAGAGAATGGAAGCCAGACCTTAGAAGCAGAGGCCTCTGCCTTGTGCCCCTTTCTTGCGCTTCATATATTCATGATTTCGACTAG 984 0.4472 MEHRDFHLQRHQLQQEYAPYYNPSFTYEAWNSSNLCPFTTESGQSTEINLRDKGKEYDLDPQRSSGEDMLTKDEGSVSDNIYLPSSCANDSSISEHSDHVTGKEIWPAGIALTNKTTSYNTLGAASSSSSSTLSTLERPPPLLLSCSLGLTSQMLLGGSSCGDLRLSYDSFGLDDMQQRENSPSNSSNKISEFVSRSGVGRAKRSGSWSQLKEYEGRAKKSRTSCPTLKVTKEKVGDRIQTLQRLVAPFGKTNTASVLNETIGYIHFLHDQIQTLSIPYMKSWKTKPFGTVQLDSREENGREWKPDLRSRGLCLVPLSCASYIHDFD 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0148 327 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 104 321 - -
Lele52g0148 327 MobiDBLite consensus disorder prediction 175 194 - -
Lele52g0148 327 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 232 281 IPR036638 GO:0046983
Lele52g0148 327 CDD bHLH_AtbHLH_like 229 276 IPR045239 -
Lele52g0148 327 MobiDBLite consensus disorder prediction 52 75 - -
Lele52g0148 327 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 219 268 IPR011598 GO:0046983
Lele52g0148 327 MobiDBLite consensus disorder prediction 52 74 - -
Lele52g0148 327 MobiDBLite consensus disorder prediction 175 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0148 Lele-ChrLele52 889051 891109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0148 159 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 48.555 8.10e-38 138