Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0143 ATGGCTGGTTTATTCTCACTAGGCGGTGGAGGAGGAGGAGTTAGGGGAGGAGGAGGTAGCAACCAGGACGACGAACCCCACCATCACCACAATAACCCACCCACGGGAGTTCCTCATCCAGACGCCTTCTTCTGGTACAAGAATAATGAAGACGTATCTTATTACAGAGGCTTCGAGCTGTGGAACCAGCAGCAGCAGCAGCAGGTCATGCCTCCTCAAGCGAGGCCGCTTCTCCATCAAGATCCTTACTCCCTAGGGGTGGGGCCGAGCAGCAGGAGCTCCGATGATCAGTCGTCGTCGAGATCGGGCGTCATGATGATGCGTTCCGGCGGCGGGAGCAGCGGCGCCGGAGGAATAAGCTGCCAAGACTGTGGGAACCAGGCGAAGAAGGACTGCCCACACATGAGGTGCAGGACTTGCTGTAAGAGCCGTGGCTACGACTGCCAGACGCATGTGAAGAGCACTTGGGTTCCGGCCGCCAAGCGACGCGAGCGACAGCAGCAGCAGCAACTTCAGCTTCGAGCGGCAGACAACAATCCCAAGAGGCTGAGAGATACTTGTAATAATAACCCCAGCCCCCCCACTCATGTGCAAATGCCAACCCATTCTTCTTCAGCAGAAGGGTTAGAGCATGGGAATTTTCCAGCGGTGGTTAGTTCCTCGGCGGAGTTCCGGTGCGTACGGGTTAGCTCCATGGACGAGTCTGACGAGCAATACGCGTACCAGACGGCCGTGAACATCGGAGGCCATTTATTCAGAGGAGTTCTCTATGACCAAGGCCCCGATCCCATTTATATGTCCACTGCTGATACATCTCCCGGTGGAGCCGTCCAGCCCCTCAATCTCATTGCCGCCACCGGTGCATCTGCTCTTCCCGCTGCCGCCGCCGGGGCTTCCTCCACTGGGCCGCTCCTCAATCCTTCCTTGTACGCAGCGCCACTTAACCCTTTCATGTCTGGCAGTGGTACGCAGTTCTTTCCTCACTCAAGATCTTGA 996 0.5703 MAGLFSLGGGGGGVRGGGGSNQDDEPHHHHNNPPTGVPHPDAFFWYKNNEDVSYYRGFELWNQQQQQQVMPPQARPLLHQDPYSLGVGPSSRSSDDQSSSRSGVMMMRSGGGSSGAGGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCQTHVKSTWVPAAKRRERQQQQQLQLRAADNNPKRLRDTCNNNPSPPTHVQMPTHSSSAEGLEHGNFPAVVSSSAEFRCVRVSSMDESDEQYAYQTAVNIGGHLFRGVLYDQGPDPIYMSTADTSPGGAVQPLNLIAATGASALPAAAAGASSTGPLLNPSLYAAPLNPFMSGSGTQFFPHSRS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0143 331 MobiDBLite consensus disorder prediction 86 107 - -
Lele52g0143 331 MobiDBLite consensus disorder prediction 180 207 - -
Lele52g0143 331 MobiDBLite consensus disorder prediction 76 117 - -
Lele52g0143 331 Pfam Domain of unknown function (DUF702) 118 262 - -
Lele52g0143 331 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 214 261 IPR006511 -
Lele52g0143 331 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 16 315 IPR007818 GO:0003700|GO:0006355
Lele52g0143 331 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 120 162 IPR006510 -
Lele52g0143 331 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0143 Lele-ChrLele52 849966 851484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0143 1 320 C2H2 Transcription Factor Family AT5G66350 46.957 2.04e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele52g0143 DUF702 4.2e-62 No_clan