Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0134 ATGGTCAACTGGAGTTGGAAAGCCACTTTCCGATTGATCAAACACTCGACCAGATTATTCTCGGAACGCCGATGTATCCCTCCGGCTATAGTTTCCGGATTCAGGGGTTTCTCCAGTGGATGTAGCGCTCAGTTACAATGCAACATTTTTCGTGGAAAGCAGATGCTTTTCCCTATTTCTGATTACGTACAAACACTAGCAATCCGTATAGGAATGCCGGGTGGAGTTCAGCGTCAATGCTATAGTTCCCTAGCTGGGTTGGTTCATAGGAGCCCTCGGTTTTCAACGTTAAATGACGAGGATATTAGATATTTTGAGGGCATACTTGGGAACAAAAATGTCATCCAGGACGAGGAGAGGCTTATTGCTGCCAATACTGATTGGATGCACAAATATAAAGGATCCAGTAAACTTCTTCTGCTGCCACGGACCACCGAGGAGGTATCTCAGATACTAAAATACTGCAACTCTAGATGCTTGGCTGTTGTTCCTCAAGGTGGAAATACTGGTCTTGTGGGTGGAAGTGTACCTGTTTTTGATGAAGTGATTATCAATCTCAGTTTGATGAATAAAATCATATCTTTTGACAAGGTAAGTGGTATATTGGTGTGTGAAGCAGGATGCATATTGGAAAATATAATAACATTCCTGGACAATGAAGGATTTATTATGCCACTAGACTTAGGTGCCAAAGGCAGCTGCCAGATTGGTGGAAATGTCTCAACTAATGCTGGTGGTTTGCGCCTTGTTCGCTATGGATCCCTCCATGGAAATGTACTTGGTCTTGAAGCTGTTATAGCAAATGGTACTGTAATTGACATGCTTAAGACACTACGCAAAGATAACACTGGCTATGACTTGAAACATCTATTTATAGGTAGCGAAGGTTCCCTAGGAATTGTTACTAAGGTTTCCATACTTACGCCACCAAAATTATCTTCCACCAACGTGGCTTTTCTTGCTTGTAAAGATTATATCAGCATCCAGAAATTGCTACAGGAAGCAAAGAGGAGACTTGGGGAGATATTATCTGCATTTGAATTTTTAGATGGCCAATCTATGAATTTGGTTTTAAATCATTTGGAAGGTGCACGGAATCCATTACCTGCATCAATGCATGACTTTTATGTTCTGATTGAGACTACAGGAAGTGATGAATCTTTTGACAAACAAAAGCTTGAAGCATTCTTACTTCACTCTATGGAAAATGATTTGATATCTGATGGCGTTCTTGCCCAAGACATAAGCCAAGCTTCATCATTTTGGCACTTACGTGAGGGCTTACCAGAGGCACTAACAAGAGCAGGAGCTGTTTACAAGTATGATTTATCAATACCTGTTGAAAAGATGTACACTCTTGCCGAGGAAATGCGCACTAGACTCGGGAATGTAGCTAATGTAGTAGCATATGGTCACCTAGGAGATGGTAATTTGCACTTAAATATCTCAGCTCCCCAGTATGATGATAAGATTTTAACACAAATAGAGCCCTATGTGTATGAGTGGACATCGAAGCACAATGGCAGTATAAGTGCAGAGCATGGCCTTGGATTAATGAAAGCTAATAAGATTTTCTACAGTCAGTCACATGAAATGGTGCAATTAATGGCCTCAATCAAGAATCTGCTGGACCCCAACAAAATACTCAACCCATATAAAGTTCTCCCAGACTCTGCCTGTTCATAG 1686 0.4116 MVNWSWKATFRLIKHSTRLFSERRCIPPAIVSGFRGFSSGCSAQLQCNIFRGKQMLFPISDYVQTLAIRIGMPGGVQRQCYSSLAGLVHRSPRFSTLNDEDIRYFEGILGNKNVIQDEERLIAANTDWMHKYKGSSKLLLLPRTTEEVSQILKYCNSRCLAVVPQGGNTGLVGGSVPVFDEVIINLSLMNKIISFDKVSGILVCEAGCILENIITFLDNEGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVIANGTVIDMLKTLRKDNTGYDLKHLFIGSEGSLGIVTKVSILTPPKLSSTNVAFLACKDYISIQKLLQEAKRRLGEILSAFEFLDGQSMNLVLNHLEGARNPLPASMHDFYVLIETTGSDESFDKQKLEAFLLHSMENDLISDGVLAQDISQASSFWHLREGLPEALTRAGAVYKYDLSIPVEKMYTLAEEMRTRLGNVANVVAYGHLGDGNLHLNISAPQYDDKILTQIEPYVYEWTSKHNGSISAEHGLGLMKANKIFYSQSHEMVQLMASIKNLLDPNKILNPYKVLPDSACS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0134 561 Pfam FAD binding domain 138 273 IPR006094 GO:0050660
Lele52g0134 561 Gene3D - 88 187 IPR016167 -
Lele52g0134 561 FunFam D-2-hydroxyglutarate dehydrogenase, mitochondrial 88 187 - -
Lele52g0134 561 Gene3D - 190 311 IPR016169 -
Lele52g0134 561 FunFam D-2-hydroxyglutarate dehydrogenase mitochondrial 436 514 - -
Lele52g0134 561 Gene3D - 515 555 IPR016171 -
Lele52g0134 561 SUPERFAMILY FAD-linked oxidases, C-terminal domain 315 557 IPR016164 GO:0003824|GO:0050660
Lele52g0134 561 PANTHER D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL 85 558 - -
Lele52g0134 561 FunFam D-lactate dehydrogenase mitochondrial 515 555 - -
Lele52g0134 561 FunFam D-2-hydroxyglutarate dehydrogenase, mitochondrial 190 310 - -
Lele52g0134 561 Gene3D - 436 514 - -
Lele52g0134 561 SUPERFAMILY FAD-binding/transporter-associated domain-like 100 310 IPR036318 GO:0050660
Lele52g0134 561 Pfam FAD linked oxidases, C-terminal domain 314 554 IPR004113 GO:0003824|GO:0050660
Lele52g0134 561 FunFam D-2-hydroxyglutarate dehydrogenase mitochondrial 312 434 - -
Lele52g0134 561 ProSiteProfiles PCMH-type FAD-binding domain profile. 132 311 IPR016166 GO:0071949
Lele52g0134 561 Gene3D - 313 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0134 Lele-ChrLele52 792419 798981 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0116 49 711279 714318 Lele52g0134 52 792419 798981 hybridization
Lele50g0129 50 789697 796349 Lele52g0134 52 792419 798981 hybridization