Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0118 ATGCCTCCTCTTCACTTTCTACTACTGGTGCTCTGTGCACCGTTCCTAACGTGCGCAGAGCGAAGCAGCGTCGCCATTGCTGAGATCAGAGCCCTCACGTCCTTCAGGCTCAACCTTCAGGATCCTCTCGGCGCTCTCGATGGTTGGGATCCTTCCACGCCGGCCGCTCCTTGCGACTGGCGCGGAGTTGCTTGTTACAACAACAGGGTCACCGAGTTGCGCTTGCCGAGGCTTCAACTCAGTGGCCGGCTTACTGACCGCCTTTCCGACTTGCCCATGTTGCGCAAGCTCAGCCTTCGCTCAAATTCCTTCAACGGCACAATCCCTTTGTCGCTTGGTAAATGTTCCTTCCTGCGCGCCGTGTTTCTCCAGTACAACTCACTCTCCGGTATTCTTCCGCCGGAGATCCGAAACATCACTGGCCTTCAGATTCTTAATGTCGCGCAGAACCGTCTCTCCGGCAGAATCCCCGGCGACCTCCCGTTGAGCCTGAAGTACGTCGACCTCTCGTCGAACTCCTTTTCTGGCGAGATTCCGAGTGCCATTGCCAGCCTTTCTCAGCTTCAGCTCATCAACCTGTCGTACAACCAGTTCTCGGGCGAGATTCCGGCTAGCTTTGGACAGCTTCAGCAGCTCGAATACCTCTGGCTTGATCACAATCTTCTCGGAGGAACTCTCCCCTCGGCACTCGCTAACTGCTCTTCCCTCGTGCATCTCAGCGTAGAAGGAAATGGGCTTGGAGGAGTGATTCCGGCGGCCATGGCAGCTCTTCCGAGGCTTCAGGTGATATCTCTCTCTCAGAATAATCTCACCGGATCGATCCCTGCTTCCATTTTCTGCAACATTTCGGTCTACACGCCGTCACTTCGAATCGTTCAGTTAGGATTTAATGGTTTCACGGATATTGTCGAGCCTCGGGCATCAACGTGTTTCAGTGTTCTTCAGGTTTTGGACATTCAGCACAATAGCATACACGGCACGTTTCCCTTGTGGATAACGAATATGTCCACGTTAACAATGCTTGATGTGTCGAGTAACGCATTTTCTGGCGAGATTCCATCAGAAATCGGAAACCTCGCGAAATTGGAGGAGTTAAGGATGGCCAACAATTCATTTACTGGGATGATTCCGGAGGAAATCAAGAAATGTGCTTTCCTGCGTGTTATTGATTTTGAAGGCAACCGGTTTACCGGAGAAGTTCCTTCGTTCTTTGGTTATATGTCAGGTCTGAAGGTGCTGTCCCTTGGTGGGAATCTTTTCTCTGGTTCAGTTCCGGAGAGTTTTGGTAACCTTTCGGCGCTGGAAACAGTGAGTTTGAGAGGTAATAACTTGAATGGAACCATGCCTGAGGAAGTCATGGGATTGAGCAATATTTCAAGTCTTGATCTTAGCGGAAATAAATTTACGGGTCAGATATCTTCAAGCATTGGGAACCTGAGCCGATTGATGGTTCTCAATCTGAGTGGCAACGGCTTTTCTGGAAAAATCCCTGCCAGTTTGGGGAACCTTTTCAGGCTAAGTACACTTGACTTGAGCAAACAGAATCTTTCTGGGGAGTTACCATTTGAGCTTTCAGGTTTGCCGAATCTGCAGGTTATTGCTCTGCAGGAGAACAGATTATCTGGGGACGTTCCTGAAGGGTTTAGCAGTTTGATAAGTTTGCGATATATGAACCTGAGCTCTAATGCGTTCTCGGGACATATTCCTCAAAATTATGGCTTTCTTCGATCACTGGTTGCTCTTTCTTTGTCTGACAATCACATTACAGGAGTAATTCCTTCGGAGATCGGAAACTGCACTGATATTGAGATTCTTGAGCTTGGTTCAAATTCTTTGACAGGTCACATTCCAACTGATCTCACTCGACTCGCCCATTTGAGAGAGCTTGATTTGAGTAGAAACAAATTAACCGGAGATATACCCGGTGATATCTCCAAATGTTCTTCCTTAAATGCTCTGCTGGTGGATCACAACCGTCTTTCAGGCACAATACCTGAGTCACTGGCTGAGCTATCAAACCTGACAATGCTGGATCTCTCTGCTAACAAATTGAGCGGTGAAATATCGAGTAATATTTCCATGATGCCTAATTTAGTGTCCTTCAATGTCTCTGGAAATAAATTGGAAGGTGAAATACCTCCAACCTTGGGTGCTCGATTCAACAATGCCTCTGCATTTGCGGATAATCAGAACTTATGTGGGAAGCCACTGGATAGGCAGTGTGAAAACGTAGTTGATAGGGACAGGAAGAGGTTGATTGTGTTGATTGTTGTAGTTGTTGCCGGAGCTTGCTTACTATCATTGTGTTGCTGCTTCTACATATATAGCCTTTTGCGGTGGCGGAAAAGGCTCAAGGAACGGGCGTCTGGGGAGAAAAAAAGGAGTCCTGCTAGGGCGAGTTCTGGAGCAAGTGGAGATCGAAGCAGTACTGACAATGGTGGACCAAAACTGGTCATGTTTAATACCAAAATTACACTTGCTGAAACCATTGAAGCGACTAGGCAGTTTGACGAAGAAAATGTACTGAGCAGAACAAGGTATGGACTGGTATTCAAGGCCTGCTACAACGACGGAATGGTGCTTTCAATTCGCAGACTCCAAGATGGATCACTGGACGAAAACATGTTCAGGAAAGAAGCAGAATCACTAGGGAAAGTGAAGCACCGAAATTTAACCGTTCTTAGAGGTTACTATGCCGGGCCACCTGACATGAGGCTTCTGGTCTACGATTACATGCCCAATGGAAACCTTGCAACCCTTCTCCAAGAAGCTTCTCATCAGGATGGCCATGTTCTTAATTGGCCAATGCGCCACCTCATTGCACTCGGGATTGCTCGTGGCTTAGCTTTCCTACACCAGTCCTCAATGGTTCATGGGGACGTTAAACCACAAAGTGTCCTGTTCGATGCTGATTTCGAAGCCCATTTGTCAGATTTTGGGCTCGACCGTCTTACAGTAGCCACGCCCGGCGAACCCTCCACTTCAACCTCAGTTGGCACATTGGGTTACGTGTCGCCGGAAGCTATATTAACAGGGGAAGCCACCAAAGAGTCTGATGTGTACAGCTTTGGCATAGTGTTGCTCGAGCTTCTTACAGGAAAGCGACCGGTGATGTTCACACAGGATGAAGATATAGTGAAATGGGTGAAGAAACAACTACAAAGGGGTCAAATCACGGAGTTGTTGGAACCAGGATTGCTTGAGCTCGACCCAGAATCATCCGAGTGGGAAGAGTTCTTGCTGGGTGTGAAAGTAGGCTTGCTCTGCACAGCACCTGACCCTCTCGATCGACCAACCATGTCTGACATTGTGTTCATGCTTGAAGGCTGCCGTGTCGGACCCGACATCCCATCCTCCGCCGATCCCACCTCTCAACCTTCGCCGGCGTGA 3390 0.4853 MPPLHFLLLVLCAPFLTCAERSSVAIAEIRALTSFRLNLQDPLGALDGWDPSTPAAPCDWRGVACYNNRVTELRLPRLQLSGRLTDRLSDLPMLRKLSLRSNSFNGTIPLSLGKCSFLRAVFLQYNSLSGILPPEIRNITGLQILNVAQNRLSGRIPGDLPLSLKYVDLSSNSFSGEIPSAIASLSQLQLINLSYNQFSGEIPASFGQLQQLEYLWLDHNLLGGTLPSALANCSSLVHLSVEGNGLGGVIPAAMAALPRLQVISLSQNNLTGSIPASIFCNISVYTPSLRIVQLGFNGFTDIVEPRASTCFSVLQVLDIQHNSIHGTFPLWITNMSTLTMLDVSSNAFSGEIPSEIGNLAKLEELRMANNSFTGMIPEEIKKCAFLRVIDFEGNRFTGEVPSFFGYMSGLKVLSLGGNLFSGSVPESFGNLSALETVSLRGNNLNGTMPEEVMGLSNISSLDLSGNKFTGQISSSIGNLSRLMVLNLSGNGFSGKIPASLGNLFRLSTLDLSKQNLSGELPFELSGLPNLQVIALQENRLSGDVPEGFSSLISLRYMNLSSNAFSGHIPQNYGFLRSLVALSLSDNHITGVIPSEIGNCTDIEILELGSNSLTGHIPTDLTRLAHLRELDLSRNKLTGDIPGDISKCSSLNALLVDHNRLSGTIPESLAELSNLTMLDLSANKLSGEISSNISMMPNLVSFNVSGNKLEGEIPPTLGARFNNASAFADNQNLCGKPLDRQCENVVDRDRKRLIVLIVVVVAGACLLSLCCCFYIYSLLRWRKRLKERASGEKKRSPARASSGASGDRSSTDNGGPKLVMFNTKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLQDGSLDENMFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGDVKPQSVLFDADFEAHLSDFGLDRLTVATPGEPSTSTSVGTLGYVSPEAILTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0118 1129 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 912 1115 - -
Lele52g0118 1129 FunFam LRR receptor-like serine/threonine-protein kinase 554 620 - -
Lele52g0118 1129 Gene3D Ribonuclease Inhibitor 457 744 IPR032675 -
Lele52g0118 1129 Gene3D Ribonuclease Inhibitor 161 302 IPR032675 -
Lele52g0118 1129 FunFam Leucine-rich repeat receptor protein kinase EMS1 162 246 - -
Lele52g0118 1129 SUPERFAMILY Protein kinase-like (PK-like) 816 1117 IPR011009 -
Lele52g0118 1129 Pfam Leucine Rich Repeat 482 503 IPR001611 GO:0005515
Lele52g0118 1129 ProSiteProfiles Protein kinase domain profile. 836 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0118 1129 MobiDBLite consensus disorder prediction 801 816 - -
Lele52g0118 1129 FunFam Nuclear pore complex protein NUP107 25 161 - -
Lele52g0118 1129 FunFam Uncharacterized protein 257 473 - -
Lele52g0118 1129 SMART LRR_sd22_2 209 235 - -
Lele52g0118 1129 SMART LRR_sd22_2 257 284 - -
Lele52g0118 1129 SMART LRR_sd22_2 407 433 - -
Lele52g0118 1129 SMART LRR_sd22_2 455 481 - -
Lele52g0118 1129 SMART LRR_sd22_2 335 361 - -
Lele52g0118 1129 SMART LRR_sd22_2 671 694 - -
Lele52g0118 1129 SMART LRR_sd22_2 623 652 - -
Lele52g0118 1129 SUPERFAMILY L domain-like 324 715 - -
Lele52g0118 1129 Gene3D Ribonuclease Inhibitor 26 160 IPR032675 -
Lele52g0118 1129 Gene3D Ribonuclease Inhibitor 383 456 IPR032675 -
Lele52g0118 1129 Gene3D Ribonuclease Inhibitor 303 382 IPR032675 -
Lele52g0118 1129 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Lele52g0118 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 621 741 - -
Lele52g0118 1129 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 475 1110 - -
Lele52g0118 1129 FunFam Putative LRR receptor-like serine/threonine-protein kinase 799 911 - -
Lele52g0118 1129 PRINTS Leucine-rich repeat signature 626 639 - -
Lele52g0118 1129 PRINTS Leucine-rich repeat signature 671 684 - -
Lele52g0118 1129 ProSiteProfiles Leucine-rich repeat profile. 625 647 IPR001611 GO:0005515
Lele52g0118 1129 FunFam Uncharacterized protein 475 553 - -
Lele52g0118 1129 Pfam Protein kinase domain 846 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0118 1129 Pfam Leucine rich repeat 409 468 IPR001611 GO:0005515
Lele52g0118 1129 Pfam Leucine rich repeat 576 636 IPR001611 GO:0005515
Lele52g0118 1129 Pfam Leucine rich repeat 314 371 IPR001611 GO:0005515
Lele52g0118 1129 Pfam Leucine rich repeat 163 222 IPR001611 GO:0005515
Lele52g0118 1129 SUPERFAMILY L domain-like 28 331 - -
Lele52g0118 1129 MobiDBLite consensus disorder prediction 789 816 - -
Lele52g0118 1129 Gene3D Transferase(Phosphotransferase) domain 1 912 1115 - -
Lele52g0118 1129 SMART LRR_typ_2 185 208 IPR003591 -
Lele52g0118 1129 SMART LRR_typ_2 359 383 IPR003591 -
Lele52g0118 1129 SMART LRR_typ_2 671 694 IPR003591 -
Lele52g0118 1129 SMART LRR_typ_2 91 115 IPR003591 -
Lele52g0118 1129 SMART LRR_typ_2 575 599 IPR003591 -
Lele52g0118 1129 SMART LRR_typ_2 527 550 IPR003591 -
Lele52g0118 1129 SMART LRR_typ_2 257 281 IPR003591 -
Lele52g0118 1129 SMART LRR_typ_2 407 430 IPR003591 -
Lele52g0118 1129 SMART LRR_typ_2 695 719 IPR003591 -
Lele52g0118 1129 SMART LRR_typ_2 479 503 IPR003591 -
Lele52g0118 1129 SMART LRR_typ_2 431 455 IPR003591 -
Lele52g0118 1129 SMART LRR_typ_2 209 233 IPR003591 -
Lele52g0118 1129 SMART LRR_typ_2 623 647 IPR003591 -
Lele52g0118 1129 Gene3D Phosphorylase Kinase; domain 1 806 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0118 Lele-ChrLele52 695175 698564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0118 4 1129 Receptor kinase-like Gene Family AT4G36180 69.947 0.0 1534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Lele52g0118 Pkinase 1.6e-33 CL0016