Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0101 ATGAAGGGTGAATCCTGCAGTATGGAACCTCAACAGCAACAAGCAGCAAACGAGGATGCTGGAGGGAGTGGAAGAGGAGGGTATTTGTGCCGGCAAAGCAGTACAAGGTGGACTCCCACAAGTGACCAGATAAGGATACTGAAGGACCTTTATTACAACAATGGAGTTAGGTCCCCAAATGCTGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGCAAGATAGAAGGCAAGAACGTCTTTTACTGGTTCCAGAACCACAAGGCTCGTGAACGCCAGAAGAAACGCTTCACTTCCTCCTCTGATCATCTCCCCACTCCCATGCATTTGCAGAGACCTCCTCCTTCCACTGCTACTAACAATATTCCTCCACCTTCTAACTGGAAGCCTGATCACGAATCCATTCTTCACCCCAAGTATTCTAACATACCACCATCTCACGGCGTTTCTTCTGCTTCATCTTCTTCCGCTGGGATGGTTACTCTAGGCCAGATGGGGAACTATGGCTATGGATCTATGACTATGGAGAAGTGTTTTAGGGACTGCTCAATATCAGCAGGAGGAAGCAGTGGCCCCATGAACCACAATTTAGGATGGGTAGGTATGGATCCATACTCAAACTACACGACCTTCTTGGACAAAATAAGGCCTAGCGATCAAGAAACACTTAAAGACGAACAAGAAGGAGAAGATAGAGCCCCTGAGATTGAAACCCTCCCTCTGTTTCCCATGCACGGCGAGGACATCCATGGCCACTGCAACCTCAGGTCTGATTCTTCTTACTATGGCGGTGGCTGGTATCACGCCGATGAATATGGCTTCAAGAACAATGGCTCTCACCGTACTTCCCTCGAGCTCACTCTCAACTCCTACACCCGCAGATCTCCAGATTCATCTTGA 906 0.4879 MKGESCSMEPQQQQAANEDAGGSGRGGYLCRQSSTRWTPTSDQIRILKDLYYNNGVRSPNAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSSDHLPTPMHLQRPPPSTATNNIPPPSNWKPDHESILHPKYSNIPPSHGVSSASSSSAGMVTLGQMGNYGYGSMTMEKCFRDCSISAGGSSGPMNHNLGWVGMDPYSNYTTFLDKIRPSDQETLKDEQEGEDRAPEIETLPLFPMHGEDIHGHCNLRSDSSYYGGGWYHADEYGFKNNGSHRTSLELTLNSYTRRSPDSS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0101 301 MobiDBLite consensus disorder prediction 94 158 - -
Lele52g0101 301 CDD homeodomain 35 97 IPR001356 GO:0003677
Lele52g0101 301 SMART HOX_1 32 100 IPR001356 GO:0003677
Lele52g0101 301 MobiDBLite consensus disorder prediction 1 19 - -
Lele52g0101 301 MobiDBLite consensus disorder prediction 1 35 - -
Lele52g0101 301 Gene3D - 34 100 - -
Lele52g0101 301 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 13 294 IPR044555 GO:0003700|GO:0099402
Lele52g0101 301 ProSiteProfiles 'Homeobox' domain profile. 30 96 IPR001356 GO:0003677
Lele52g0101 301 Pfam Homeodomain 34 95 IPR001356 GO:0003677
Lele52g0101 301 SUPERFAMILY Homeodomain-like 20 97 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0101 Lele-ChrLele52 604578 606333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0101 28 250 Wox Gene Family AT2G17950 41.406 1.76e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele52g0101 Homeodomain 1.6e-17 CL0123