Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0094 ATGCTCCCTCTTTCTCGCCCTGCCCCGCTTCCCGCCACATGTTTCTCCCGCAACTCTGTTTCCTCTTCACCGCCAGCGTCGCCCAATCGTGTTCCGGTCCGGCCGATCGTTGCCTCCGCCACCGCCACCGAATCTTGCTCCACTTGGACGGAGCAACAGAAATCGAGGTCCCCCTATCTCAGCTCCCTGACTATGTCTTCGTGCACGTCGCTGTACGAGATTCTAGGGATTCCGGCGGGCGCGTCCCATCAAGAAATTAAGGCCGCCTACCGACGTTTGGCGAGAGTGTGCCATCCGGACGTGGCGGCGGTGGATCGGAAGGATTCGTCGGCGGACCAGTTTATGAAGATTCACGCCGCGTACTCCACTCTGTCGGATCCCGAGAAGCGGGCTACTTACGACAGGAACCTCTTCGTCCGTCGACAGAGGCCTTTGTCCATGTCGTCTTCATTCCCCGGTTACGGTGGCCGGAACTGGGAAACGGACCAGTGTTGGTAG 498 0.5964 MLPLSRPAPLPATCFSRNSVSSSPPASPNRVPVRPIVASATATESCSTWTEQQKSRSPYLSSLTMSSCTSLYEILGIPAGASHQEIKAAYRRLARVCHPDVAAVDRKDSSADQFMKIHAAYSTLSDPEKRATYDRNLFVRRQRPLSMSSSFPGYGGRNWETDQCW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0094 165 Gene3D DnaJ domain 59 151 IPR036869 -
Lele52g0094 165 ProSiteProfiles dnaJ domain profile. 70 137 IPR001623 -
Lele52g0094 165 CDD DnaJ 72 126 IPR001623 -
Lele52g0094 165 ProSitePatterns Nt-dnaJ domain signature. 114 133 IPR018253 -
Lele52g0094 165 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 21 147 - -
Lele52g0094 165 SMART dnaj_3 69 129 IPR001623 -
Lele52g0094 165 SUPERFAMILY Chaperone J-domain 64 140 IPR036869 -
Lele52g0094 165 Pfam DnaJ domain 71 134 IPR001623 -
Lele52g0094 165 PRINTS DnaJ domain signature 72 90 IPR001623 -
Lele52g0094 165 PRINTS DnaJ domain signature 109 129 IPR001623 -
Lele52g0094 165 PRINTS DnaJ domain signature 90 105 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0094 Lele-ChrLele52 568591 569088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0094 60 134 C2H2 Transcription Factor Family AT1G74250 40.506 1.14e-09 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0079 49 488620 489222 Lele52g0094 52 568591 569088 hybridization
Lele50g0095 50 590672 590977 Lele52g0094 52 568591 569088 hybridization