Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0076 ATGGCGGCTCCTCGTGTTGACGCTGATTATGTCAAGGAAATCGAAAAGGCCCGTCGCCACCTTCGCGCTCTCATCTACACCAAGAACTGTGCTCCTCTCATGCTTCGTTTGGCGTGGCATGACGCCGGAACCTACGATGCGAAGACAAAAACAGGGGGTCCCAATGGGTCAATCAGAAATGAGCACGAGTTGAAACACAACGCAAACAATGGTTTAAGACTAGCCGTGGAACTTTGCGAGGATGTGAAGGCCAAGCATCCAAAAATCACATATGCCGATCTGTACCAGCTTGCTGGTGTTGTTGCAGTAGAGATCACTGGGGGCCCGGCAATTGACTTCATTCCAGGCAGAAAGGGTTCATTGATATCCCCGGAAGAAGGGCGGCTTCCAGATGCTAAACAAGGTGCAAAACATTTAAGGGATGTGTTCTATCGCATGGGTCTGACGGATAAAGATATTGTGGCTCTCTCCGGAGGCCACACGCTGGGGAAGGCACATCGAGAGCGGTCAGGCTTTGAAGGCCCGTGGACAAGGGAGTATATGAAGTTCGATAATTCGTATTTTAAGGAACTGTTGAGAGAGGAGCCAAGCGACTTATTGAAGCTTCCCACAGACAAGGCTCTCGTGGAGGATCCTCAATTCCGCAAGTATGTCGAGCTCTATGCACAGAATGAGGAAGCTTTCTTCGTAGATTATGCAGCTTCCCACAAGAAACTGTCAGAGCTAGGCACGAGTTTACCCAAGTCAGCATCTGCTTCTGGGAATCGTCTCAGCTTGGCGCAGGGCATCGGATTTGCTGTTGCCACCACCGCCATCATCCTCGGTTTCCTCTGGAGCAGAAGAAGCAACTGA 852 0.507 MAAPRVDADYVKEIEKARRHLRALIYTKNCAPLMLRLAWHDAGTYDAKTKTGGPNGSIRNEHELKHNANNGLRLAVELCEDVKAKHPKITYADLYQLAGVVAVEITGGPAIDFIPGRKGSLISPEEGRLPDAKQGAKHLRDVFYRMGLTDKDIVALSGGHTLGKAHRERSGFEGPWTREYMKFDNSYFKELLREEPSDLLKLPTDKALVEDPQFRKYVELYAQNEEAFFVDYAASHKKLSELGTSLPKSASASGNRLSLAQGIGFAVATTAIILGFLWSRRSN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0076 283 ProSitePatterns Peroxidases proximal heme-ligand signature. 152 162 IPR019793 -
Lele52g0076 283 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Plant ascorbate peroxidase signature 128 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Plant ascorbate peroxidase signature 168 192 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Plant ascorbate peroxidase signature 146 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Plant ascorbate peroxidase signature 220 244 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 FunFam Cytosolic ascorbate peroxidase 17 134 - -
Lele52g0076 283 SUPERFAMILY Heme-dependent peroxidases 10 247 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 Pfam Peroxidase 19 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 CDD ascorbate_peroxidase 3 244 - -
Lele52g0076 283 FunFam L-ascorbate peroxidase, cytosolic 130 236 - -
Lele52g0076 283 Gene3D - 17 243 - -
Lele52g0076 283 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 4 247 IPR044831 GO:0004601|GO:0034599
Lele52g0076 283 ProSiteProfiles Plant heme peroxidase family profile. 72 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g0076 283 ProSitePatterns Peroxidases active site signature. 31 42 IPR019794 GO:0004601
Lele52g0076 283 Gene3D Peroxidase, domain 2 130 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0076 Lele-ChrLele52 476999 478594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0076 89 244 Peroxidase AT4G17690 32.642 8.41e-19 83.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0066 49 413325 414915 Lele52g0076 52 476999 478594 hybridization
Lele50g0076 50 499102 500924 Lele52g0076 52 476999 478594 hybridization