Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0066 ATGGCAATCATGGCTCCCTTCTCGAGCTTCATTATCGTCTTCTCGCTAGTTTCAAAAGCGAATTCTCTGAGCTCTAACTGCTATGAGAAAACTTGCCCTCTTTTGGATTCAATAGTTGCTAACACTGTGAAGAAGGCCACTGCTAATGACAACACTGTACCTGCGGCACTTCTCAGAAAGCACTTTCACGATTGTTTCGCTATGCTTCAGAACAACTTCGCTCAAAGAGGTCTATCAATGGAAGACTTGGTAGCTCGCTCAGGAGGACATACTTTAGGTTTCTCCCACTGCTCATCGTTCAGGAACAGAATCCAAAATTTTCATGCCAAAAATGACGTGGACCCTTCATTGAATCCGTCATTTGCGGCAAAACTACAATCAATTTGTCCGGTAAAAAATACGCCAAAGAATGCAGGTGTCACCATGGATCCTTCTACAACTACTTTCGATAATGCTTATTACCAGTTGATACTCCAAGGGAAGGGCCTATTTTCTTCTTATCAAGCTCTGTTTACAACCGCAAAGACCAAGAATCTGGTTTCTGAGTTTGCTGCCTCAGAAGGGCCATTTTACAGGGCTTTCGTGAAGTCCATGATCAAAATGAGCAGCTTAAATGGTGGGCAAGAGGTCAGGAGGGACTGCAGGGCGGTGAATTCGGAAAAAATGGTCACAAGATGTTTCCCATTTCAATTCGACTGCCGTTCTTTCCGTGACTACATCATGGACGCTGTCTCTCCCACTCACTCTGTTCTCGATGATGATACACAATCCTTATGGGCCAACGTTTTAGACGTAGAGCCTGATGCTTCTGCTATGGCGGCTTCTACCAACGATCCTAATGATGACCCTAAATCATCGGATGGCATGACTCCATCCTGTGATGAGCCAGTTTCTGAAGTTAAGGTGCCCCCCGCGGTCACCATCGACAATTCTTCTTGTCCCGCTTCATCTCCTAGGAATACCGTGACTTTGTCTTTGGAATCGTCCAATGATTTGGCCGATGGATTATCTTTACTCCATATACAGGATGGTGAACGGCCTCCTGATAACGCCAAAACACCGACAAGTAGTCAAGTGAGTGATTATGTTCTTTTAGAGTTTGACCTTGAAGGTCCCACGGATGCAACAGGCATCCAAAAATCCTCTCCGAACCACAATACACAAAGCAGTAGATATGGATCACAGTTTCATAATGTTAATGTCCTCCCACAACATTTTCATCATCGTCGAGATGGTCCCAGTCAATACAACTATTGGGGTAGGCGTGAACAAAACCGTGGGAATCGAGATTGGAACTTTCACAGAAGTTTTAACGGTAGGAACATGCATATGCCACCAGCCAGAGATGTTTCCAGATTTACAAGGCCTATGCCCTCCCTGCCTCCTCCATCGCCTTCTTATCCATTTTCTCAGTATCTTCCTCCATTCGCGCCACCACCTTATGGCGGCACCTACATGTGCCCTAGATATGGTCCATGTTTCCCCTATTATGCTGCTCCACCTCGTCCTGTTCCTTATATGCCACCCATACCGCCTTATGGGAACGTTCCAGCTACTCCAGATTCTGAACTATGTATTAAGATTGTTAGACAAGTCGAGTACTATTTTAGCGTTGAAAACTTAGTTAAAGATACGTACTTACGGGAACACATGGACCAACAAGGTTGGGTTCCGATGAGAGAACTGACGGACAATGTTCAAATTATATTAGCTGCTCTTCAAACTTCAAAAATTTTGGGAATCCAGGGCGACAAGACAAGGCCGCGGGATTGGCAGCCGAGTGATCTGCAGAGGTGGATTATACCTCATTCATATCAACTTGTTGATGCTTCCGAGCCATGA 1842 0.4522 MAIMAPFSSFIIVFSLVSKANSLSSNCYEKTCPLLDSIVANTVKKATANDNTVPAALLRKHFHDCFAMLQNNFAQRGLSMEDLVARSGGHTLGFSHCSSFRNRIQNFHAKNDVDPSLNPSFAAKLQSICPVKNTPKNAGVTMDPSTTTFDNAYYQLILQGKGLFSSYQALFTTAKTKNLVSEFAASEGPFYRAFVKSMIKMSSLNGGQEVRRDCRAVNSEKMVTRCFPFQFDCRSFRDYIMDAVSPTHSVLDDDTQSLWANVLDVEPDASAMAASTNDPNDDPKSSDGMTPSCDEPVSEVKVPPAVTIDNSSCPASSPRNTVTLSLESSNDLADGLSLLHIQDGERPPDNAKTPTSSQVSDYVLLEFDLEGPTDATGIQKSSPNHNTQSSRYGSQFHNVNVLPQHFHHRRDGPSQYNYWGRREQNRGNRDWNFHRSFNGRNMHMPPARDVSRFTRPMPSLPPPSPSYPFSQYLPPFAPPPYGGTYMCPRYGPCFPYYAAPPRPVPYMPPIPPYGNVPATPDSELCIKIVRQVEYYFSVENLVKDTYLREHMDQQGWVPMRELTDNVQIILAALQTSKILGIQGDKTRPRDWQPSDLQRWIIPHSYQLVDASEP 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0066 613 CDD LAM 527 589 - -
Lele52g0066 613 Pfam Peroxidase 69 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g0066 613 PANTHER - 5 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele52g0066 613 SUPERFAMILY Heme-dependent peroxidases 23 218 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele52g0066 613 MobiDBLite consensus disorder prediction 375 392 - -
Lele52g0066 613 ProSiteProfiles Plant heme peroxidase family profile. 22 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g0066 613 Gene3D - 28 67 - -
Lele52g0066 613 MobiDBLite consensus disorder prediction 272 299 - -
Lele52g0066 613 Gene3D Peroxidase, domain 2 68 201 - -
Lele52g0066 613 Pfam La domain 528 560 IPR006630 -
Lele52g0066 613 ProSiteProfiles La-type HTH domain profile. 518 613 IPR006630 -
Lele52g0066 613 ProSiteProfiles Plant heme peroxidase family profile. 66 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele52g0066 613 SMART la 522 589 IPR006630 -
Lele52g0066 613 Gene3D - 515 595 IPR036388 -
Lele52g0066 613 FunFam Peroxidase 61 201 - -
Lele52g0066 613 MobiDBLite consensus disorder prediction 273 287 - -
Lele52g0066 613 MobiDBLite consensus disorder prediction 373 392 - -
Lele52g0066 613 Gene3D - 202 218 - -
Lele52g0066 613 SUPERFAMILY "Winged helix" DNA-binding domain 517 593 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0066 Lele-ChrLele52 420888 426115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0066 11 66 Peroxidase AT5G42180 57.143 2.32e-13 69.7