Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0059 ATGCATGAGCTCGATGTACTTAATGAAGAAGAGAGAGAGAAAAGCTTACCGGTTTTGGCTTATACGCCGTCCAAAGATAAGACCAAGGAAGCCAAGAATATGCCGTCCGAACTGGCAAAGCCACTCAGTTCCAAAAGCAGTTCCCGCCAAACTATGTTGGTAGGGTTTGTTTCAGGCATTTTAGCAGTAATGGTGGTTGCATTATTGTTGCACTGCCTCTTCAAGAGAAAGGGTATTCTGCTTAAATGCAAAAGGGGTTTGAAAGGTGCAAAAGATGGAAAGAGTTTGAAATATGATAAGATATCGTTGAGGCGTTTTGATTTGGAGGAGCTAGAGAAGGCTACAAATAATTTTAGCCCAGATTGCATGCTGGGTTCTGGTGCATTTGGAACGGTGTATAAAGGAACCTTTGAATTAGAAGGAACCTTAGCCATTAAAAGAGCTCATGGTGAATCATTCTTAAGCAAGGAAGAGTTCAGAAATGAAGTGAGCCTCATTTGGAAAGTAAATCACAGGAATCTTGTTAATTTGGTGGGATATTGTGAAGAACCTGGAGATGGGGTCCAAATGCTGGTTTATGAGTATGTGCCTAATGGTTCTCTGCTCGAGTACATGATGGGAAAAAGAGGGAAGAGCTTAACTTGGAGGCAAAGAGTAAACATAGCAATAGGAGCAGCTAAAGGTACATTGAAGAGCTTAACTTGGAGGCAAAGAGTAAACATAGCAATAGGAGCAGCTAAAGGCATAGCTTATTTGCATGAAGGGGTGAAACCAAGTATAATTCATCATGATATCAAACCGAGCAACATCTTAATAGGGGAAAGGTTAGAGGCTAAAGATTCAGATTTTGGGTTGATAAAATCAGGACCAACTGGTGATCAATCTCATGTTAGCAGCCAAATCAAAGGAACCCCAGGATACCTTGATCCCACTTATTGTTCAACCTTTCATTTGACCACTTTTAGTGACGTTTATAGTTTCGGTGTCATACTTCTCCAACTTATTTCTACTGGACCAGCCGTTATGTTGAAGATGGGTCAGCTTGCCCTCCGATGTGGGGCTCAAGTGCCAAAGCATCGTCCTACAATGACTCAAGTGTGCCAAGAGCTACAAGAAGCTCTTCATGCAGCTGATAACTTGATTGGCAAACTACCTTCGAAAAATTTTAAAAAATCAAGTGGCACATCTCAAGAATTAACGGAACCAGAGATTCTCAAATCTATAGAAAACTATGACCGTTCAGAGAGTTTTGTAAGCATAGATGGTGTTGGATTCCAGAAGTTTCATATTGATATGGATAGTTTATCCTTTCAAAGTACAAACTTAAGATGCCTAGAAAATAATAGTATTAGTACTGATACTGATGACAACACTTTGAGGAGAATTCAAGAAGATATATAA 1401 0.3997 MHELDVLNEEEREKSLPVLAYTPSKDKTKEAKNMPSELAKPLSSKSSSRQTMLVGFVSGILAVMVVALLLHCLFKRKGILLKCKRGLKGAKDGKSLKYDKISLRRFDLEELEKATNNFSPDCMLGSGAFGTVYKGTFELEGTLAIKRAHGESFLSKEEFRNEVSLIWKVNHRNLVNLVGYCEEPGDGVQMLVYEYVPNGSLLEYMMGKRGKSLTWRQRVNIAIGAAKGTLKSLTWRQRVNIAIGAAKGIAYLHEGVKPSIIHHDIKPSNILIGERLEAKDSDFGLIKSGPTGDQSHVSSQIKGTPGYLDPTYCSTFHLTTFSDVYSFGVILLQLISTGPAVMLKMGQLALRCGAQVPKHRPTMTQVCQELQEALHAADNLIGKLPSKNFKKSSGTSQELTEPEILKSIENYDRSESFVSIDGVGFQKFHIDMDSLSFQSTNLRCLENNSISTDTDDNTLRRIQEDI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0059 466 PANTHER OS01G0750732 PROTEIN 231 387 - -
Lele52g0059 466 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Lele52g0059 466 MobiDBLite consensus disorder prediction 1 43 - -
Lele52g0059 466 Gene3D Transferase(Phosphotransferase) domain 1 230 386 - -
Lele52g0059 466 Pfam Protein tyrosine and serine/threonine kinase 123 340 IPR001245 GO:0004672|GO:0006468
Lele52g0059 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Lele52g0059 466 MobiDBLite consensus disorder prediction 1 16 - -
Lele52g0059 466 Gene3D Transferase(Phosphotransferase) domain 1 104 229 - -
Lele52g0059 466 ProSiteProfiles Protein kinase domain profile. 118 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0059 466 SMART serkin_6 118 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0059 466 SUPERFAMILY Protein kinase-like (PK-like) 103 393 IPR011009 -
Lele52g0059 466 FunFam Putative LRR receptor-like serine/threonine-protein kinase 90 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0059 Lele-ChrLele52 387998 391188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0059 38 374 Receptor kinase-like Gene Family AT1G51880 35.620 8.13e-60 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele52g0059 PK_Tyr_Ser-Thr 8.7e-35 CL0016