Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0055 ATGTTATCTCTAACATATTTGTTCTTGGATAGTGATGCATCAGGTTATGAAAAATATGCGACTGCCGACTGGGGAAGGAGTGAAGGAAAGGCAGAACACCGCCTCCTCACCGCCACTTCCAAAATTGCAGTGTTTTCAAGGACCAGAGCAGAAGAGAGCGTTATAAAGAGAGAGATTGCAGGGTTCTGGAGGCAGAAGCGGATTGAGGAAGAAGACCACCTCCTTGCAGCTATTAAAGCAGCAGCTAAACTCCGAGCTCGATCTCACGGTCTTTTTCTCTCTCTCTTTTTTCTTCTTTCTTGTTCTTTCCACTACTTAGAGCAAGACTACCTGAGCTTCCAAGAGTCCTTGGAGAACGAGAGAGATGAAGACGATGGCCTCGAGAAGAAAAGGCTGATGGTCACTGATGCTTGGAAAAGCAAAAATGATGCGGAGGACAAGGAAGGGCGCGTTGGAATAATGGACTGGTGGACAAAAAGCAAGTACGCGTATTTAAACCAACCAGCCGTAGCTTCCATGGAACCTCCTAAGATTAAGAAGAGAGCCTCTTCTTATATTCCCAACAGTCTGTCTTACAAGCCCAAGCCTTTGTATCCAACCTCCATTGGTCTGTATGTAGCGAAAGTCTTCCCTGACTTAGTCTTTTATTTTCCTAGCTTTCATTCAGATCTTGCCCTGCAATTCCAGCTTCTCACTCCTCTTGTTGCTCTGTTCTTCTGTTTCCTCAGATCGGATTCTGAATTCGATCCTTCCAGCTTCGCAATGGCAAAGCCCAAGCACTCTCGCCTACCTCCTCGCAAATCCTGTTCTTCAACTCTCATCCTCTTCTTTACTTTTTTGTTCGCCTTCCTCCTCATCCTTCTTGTATCCTTTGGGATCCTTTCCCTTCCCAGTAGCTCCCGTCGTGATGCACACGTGGCCAACGATCTTAACTCCATTGTTCGGAGCACGCTTGATAAAAGAGAGGGTGAAGAGAGGAGTGAGCAGTGGGTTGAACTAATATCTTGGGAGCCTAGAGCTTTTGTTTATCACAATTTTTTGACAAAGGAGGAATGTGAATACCTAATTAATCTGGCCAAGCCTCATATGCAGAAGTCAACAGTTGTTGATAGCGGGACTGGAAAGAGTACAGATAGCAGAGTACGTACAAGTTCTGGAACTTTTCTACCCAGAGGACGTGATAAGATTGTGAGGAACATCGAGAAAAGGATTGCTGATTTTACTTTTATCCCTGTAGAGCATGGAGAAGGACTTCAAGTTCTCCACTATGAAGTTGGACAAAAGTATGAGCCTCACTATGACTACTTTCTTGATGAGTATAACACTAAGAATGGGGGTCAGCGGATAGCTACAGTACTTATGTATCTCACAGATGTTGAAGAAGGGGGTGAGACAGTGTTCCCAGCTGCCAAGGGCAACTTCAGCTCTGTGCCATGGTGGAATGATCTCTCTGAATGTGGAAAAAAAGGACTTTCAATTAAGCCAAAGATGGGTGACGCTCTACTTTTCTGGAGCATGAAGCCTGATGCAACTTTAGATCCCTCTAGTTTGCATGGTGGTTGTCCAGTGATTAAGGGTAATAAATGGTCAAGTACCAAGTGGATGCGCGTCAATGAATACAAAATTTGA 1629 0.4475 MLSLTYLFLDSDASGYEKYATADWGRSEGKAEHRLLTATSKIAVFSRTRAEESVIKREIAGFWRQKRIEEEDHLLAAIKAAAKLRARSHGLFLSLFFLLSCSFHYLEQDYLSFQESLENERDEDDGLEKKRLMVTDAWKSKNDAEDKEGRVGIMDWWTKSKYAYLNQPAVASMEPPKIKKRASSYIPNSLSYKPKPLYPTSIGLYVAKVFPDLVFYFPSFHSDLALQFQLLTPLVALFFCFLRSDSEFDPSSFAMAKPKHSRLPPRKSCSSTLILFFTFLFAFLLILLVSFGILSLPSSSRRDAHVANDLNSIVRSTLDKREGEERSEQWVELISWEPRAFVYHNFLTKEECEYLINLAKPHMQKSTVVDSGTGKSTDSRVRTSSGTFLPRGRDKIVRNIEKRIADFTFIPVEHGEGLQVLHYEVGQKYEPHYDYFLDEYNTKNGGQRIATVLMYLTDVEEGGETVFPAAKGNFSSVPWWNDLSECGKKGLSIKPKMGDALLFWSMKPDATLDPSSLHGGCPVIKGNKWSSTKWMRVNEYKI 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0055 542 FunFam Prolyl 4-hydroxylase 4 330 537 - -
Lele52g0055 542 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 414 537 IPR005123 -
Lele52g0055 542 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 280 536 IPR045054 -
Lele52g0055 542 Pfam 2OG-Fe(II) oxygenase superfamily 418 536 IPR044862 -
Lele52g0055 542 Gene3D q2cbj1_9rhob like domain 331 537 - -
Lele52g0055 542 SMART p4hc 338 536 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0055 Lele-ChrLele52 356008 363558 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0055 52 356008 363558 Lele53g1285 53 21326173 21328646 CCT
Lele52g0055 52 356008 363558 Lele54g1257 54 17919882 17922306 CCT
Lele55g0211 55 1322323 1324723 Lele52g0055 52 356008 363558 CCT
Lele49g0048 49 308748 315025 Lele52g0055 52 356008 363558 hybridization
Lele50g0056 50 384720 388129 Lele52g0055 52 356008 363558 hybridization