Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0049 ATGTCTGAACTGACTTCCGGCATACGAAGCAGTCAGGCTCATGGTGGTGAAAAGGAAAATGATGAAACTAGATATGAACTATTCCTTCTGGATGAAGAACAAATTGAACTGTATCCCCAGGGGGCTGGAGGGAAGATCCTAAAGGGGTTTCACAGCTCCAAGGCAGAGAGTCTCACGGATGAAATAGTTATTGTGGTATTGGCCTGGTTCACTCAGACTAAACCGGAGCGAGATGCCACGAGAGGGAACAAGAAGGAAACTTTTTCTGGCTCCACGCGTGTCTCTGATTTGATTGAGCCGTGCCAATATCTCAATGCTATTTCATTTCGAGTACGTGACATCCCCAGAACCCACGAGATCAGACTCAAAGTTGTCGATTGTACTTTTAGCTTTTGCTTTTTGGCGCTAATGGCGATCGAGGAGGACCTTGAGAGCTGTGGGAGCAGAGCTTGTGTACAGTCACCGCAAGCTCATCCTCGTCCACGTAGGAAGAAATTGGAGGTGTACAATGAGGTGCTCCGTCGAATTCAAGAGTTAAATTGTGAGGAGGCCAATGTTCCGGGGTTTGATGACCAGCTCTGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCATTGGATGTGAATGTGGAGAGGGCAGAAGATGTTCTTAGTCACAAGAGATTGCTCAAGTTGGCAGAGGACCCTGCCAATCGACCTGTATTTCAAGTTCGCTCGGTGCAGGTATATCCTTCTGGATGTGCTAATTTTGCTGACTCAACGCCTTCCGATCCTTCTGAGAAAGAAGATGTGAAGAGTTCTTTTAACTATTCTTTTAAGCAGGGACTTCATCCACCACCTACTTTTGGCTCATCTTCTAATCTAGAAGCTCTTTCCCGCCAAGCATGTAAAAATAATGTTGAAGATGGGGATGGGGATATGGATTTGACACCATGCTTTTACAGGCCCATGCACGAGATTACCTTTTCAACTGTTGACAAGCCTAAAGTCCTTAGTCAGTTAACTTTACTACTTGGGGAGATGGGACTGAACATTCAAGAAGCTCATGCATTTTCCACTACAGATGGATTTTCTCTCGATGTCTTTGTTGTTGAAGGGTGGCCAAATGAGGAAACTGAGGAGCTTAAACGTCTACTGGAAAAGGAAATTTTGAAGTTTAAGCGGGAGCAACATCTGTCAAAACAGGGCTTGCCTTCTACTGCCATTGAACATTATTATCAGGCAAGGATGGAACCCTTCGCTCATTGGGTAGAAATACCATCTGATGGAACCGATGTCTGGGAAATTGATATCAACCAGCTGAAATTTGAAAACAAAGTTGGCTCTGGGTCATTCGGTGATTTGTACAGAGGTACTTATTGCAGCCAAGATGTAGCTATCAAAGTCCTTAAGCCTGACAAAATAAATACAGAGATGTTGAGAGAATTTGCCCAGGAAGTTTATATCATGAGGAAAATTCGACACAAGAATGTTGTGCAGTTCATTGGAGCATGCACTCAGCCACCAAATCTGTGTATTGTTACTGAGTTTATGTCTAGAGGAAGCGTCTATGACTTTCTGCACAAACAAAGAGGTGTTTTTAAGCTTCCTTCTTTACTAAAAGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAAGTGGTAAAGGTTGCTGATTTTGGAGTTGCCAGAGTGCAAACTCAATCTGGAGTGATGACAGCTGAAACTGGAACATACCGTTGGATGGCTCCTGAGGTCATTGAACACAAACCGTATGACCAGAAGGCAGATGTTTTTAGTTTTGGAATAGCTCTTTGGGAGCTTCTAACAGGAGAACTCCCTTATGCTTACCTGACCCCGTTACAAGCAGCAGTAGGCGTGGTGCAGAAGGGCCTACGACCTTCAATCCCCAAGAATGCACACCCAAGGCTTTCTGAACTTCTCCAGCGATGTTGGCAACAAGATCCAATTGAGAGACCGAACTTCTCAGAAATATTGGAAATTCTTCAGCAGATAGCAAAGGAGGTTACTGACGATCCCCCCAAAGATAAATCATCTCATCATGGCTTTCTCTCGGCACTAAGACGGGCCAATCAGCAATTTTGA 2148 0.4413 MSELTSGIRSSQAHGGEKENDETRYELFLLDEEQIELYPQGAGGKILKGFHSSKAESLTDEIVIVVLAWFTQTKPERDATRGNKKETFSGSTRVSDLIEPCQYLNAISFRVRDIPRTHEIRLKVVDCTFSFCFLALMAIEEDLESCGSRACVQSPQAHPRPRRKKLEVYNEVLRRIQELNCEEANVPGFDDQLWLHFNRLPARYALDVNVERAEDVLSHKRLLKLAEDPANRPVFQVRSVQVYPSGCANFADSTPSDPSEKEDVKSSFNYSFKQGLHPPPTFGSSSNLEALSRQACKNNVEDGDGDMDLTPCFYRPMHEITFSTVDKPKVLSQLTLLLGEMGLNIQEAHAFSTTDGFSLDVFVVEGWPNEETEELKRLLEKEILKFKREQHLSKQGLPSTAIEHYYQARMEPFAHWVEIPSDGTDVWEIDINQLKFENKVGSGSFGDLYRGTYCSQDVAIKVLKPDKINTEMLREFAQEVYIMRKIRHKNVVQFIGACTQPPNLCIVTEFMSRGSVYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYAYLTPLQAAVGVVQKGLRPSIPKNAHPRLSELLQRCWQQDPIERPNFSEILEILQQIAKEVTDDPPKDKSSHHGFLSALRRANQQF 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0049 715 FunFam Serine/threonine-protein kinase isoform 1 424 512 - -
Lele52g0049 715 MobiDBLite consensus disorder prediction 1 20 - -
Lele52g0049 715 SMART serkin_6 434 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0049 715 CDD STKc_MAP3K-like 440 683 - -
Lele52g0049 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672|GO:0006468
Lele52g0049 715 ProSiteProfiles Protein kinase domain profile. 434 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0049 715 SUPERFAMILY ACT-like 317 383 IPR045865 -
Lele52g0049 715 Coils Coil 369 389 - -
Lele52g0049 715 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 267 691 - -
Lele52g0049 715 Gene3D Transferase(Phosphotransferase) domain 1 513 711 - -
Lele52g0049 715 PRINTS Tyrosine kinase catalytic domain signature 508 521 IPR001245 GO:0004672|GO:0006468
Lele52g0049 715 PRINTS Tyrosine kinase catalytic domain signature 610 632 IPR001245 GO:0004672|GO:0006468
Lele52g0049 715 PRINTS Tyrosine kinase catalytic domain signature 591 601 IPR001245 GO:0004672|GO:0006468
Lele52g0049 715 PRINTS Tyrosine kinase catalytic domain signature 545 563 IPR001245 GO:0004672|GO:0006468
Lele52g0049 715 PRINTS Tyrosine kinase catalytic domain signature 654 676 IPR001245 GO:0004672|GO:0006468
Lele52g0049 715 ProSitePatterns Protein kinases ATP-binding region signature. 440 461 IPR017441 GO:0005524
Lele52g0049 715 SUPERFAMILY Protein kinase-like (PK-like) 409 683 IPR011009 -
Lele52g0049 715 Pfam Protein tyrosine and serine/threonine kinase 434 683 IPR001245 GO:0004672|GO:0006468
Lele52g0049 715 Gene3D Phosphorylase Kinase; domain 1 424 512 - -
Lele52g0049 715 ProSiteProfiles ACT domain profile. 319 399 IPR002912 -
Lele52g0049 715 FunFam serine/threonine-protein kinase HT1 513 704 - -
Lele52g0049 715 CDD ACT_TyrKc 317 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0049 Lele-ChrLele52 313054 328126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0049 137 713 MAP Kinase Kinase Kinase AT4G35780 69.948 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele52g0049 PK_Tyr_Ser-Thr 8.5e-75 CL0016