Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0048 ATGCTCCATACCAAAAATTGGGACCAGACAAAAATGGGTGTATCTCAGAAATGGTTGAAACTAGTTCGTAGAAAATTGCTCGGCTCATCCCATAGATATATAGCTATTCCTCGCACGAGCCCCGGCACAATTTGCTCAAATGAGAGCGATAAAGCCTTTGTCGGGAGTGAAACATCCACAATTCAAGACCAGGGCTTGCCAGTCTACATACAAGAAGAAGAGGCGGCAATTAAGATTCAAGCTTGTTTCAGGGGTCACCTGGCAAGAAGGGCATATCGAGCTCTTAGAAGCCTGGTGAAGCTGCAGGCATTGGTTCGTGGGGTATTCGTGAGGAGACAATCGCGAATAGCGTTGCACTGTATGCATGTACTCGTTCGCTTACAAGTCAGGATTCGTGCAAGGCAACTTCTTGGCGGATCTCTCGCGGACTGA 432 0.4769 MLHTKNWDQTKMGVSQKWLKLVRRKLLGSSHRYIAIPRTSPGTICSNESDKAFVGSETSTIQDQGLPVYIQEEEAAIKIQACFRGHLARRAYRALRSLVKLQALVRGVFVRRQSRIALHCMHVLVRLQVRIRARQLLGGSLAD 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0048 143 ProSiteProfiles IQ motif profile. 72 100 IPR000048 GO:0005515
Lele52g0048 143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 116 IPR027417 -
Lele52g0048 143 Gene3D - 69 121 - -
Lele52g0048 143 SMART iq_5 94 115 IPR000048 GO:0005515
Lele52g0048 143 SMART iq_5 71 93 IPR000048 GO:0005515
Lele52g0048 143 ProSiteProfiles IQ motif profile. 96 122 IPR000048 GO:0005515
Lele52g0048 143 Pfam IQ calmodulin-binding motif 96 113 IPR000048 GO:0005515
Lele52g0048 143 Pfam IQ calmodulin-binding motif 74 93 IPR000048 GO:0005515
Lele52g0048 143 PANTHER IQ-DOMAIN 5-RELATED 59 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0048 Lele-ChrLele52 311248 311764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0048 12 138 IQD Protein Family AT3G51380 52.756 3.08e-34 114