Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0036 ATGGTCATTTCCGATCACAACAATCCTAATCTAATCAAACCCACAAATTTCCAAGGAATGGGAACCAGGAAGTTTGGGAACAACAGAAGAGCGTTAAGCGTGATAAATCAGAGTATAGTGGATGGTCGAGCTTATCCCTGCGTCGTTAACAAGAGGGCATTGCCTGATAAATATGAAATTTGTGAAAAGAAGCAGGCGGATCCAGTGCATCGACCGATCACCAGGAGATTTTCTGCTCAGATTGCTAGCACACAACAATCTCACGCTGAGGAAAATAAGAAGGCAAATACGTTAATTCCAAACGGGAATGAATTTGTAGATGTCATATTCGTAGACGATGAACACAAGTCACCATCAGATCAGCCAGATCATCCAGTGCCTATGTCATTAGAGCAAACAGAACCAACACATGATAAAGTGGATCAGATGGAAGAAGTTGAGATGGAAGATATAATTGAAGAGCCTATTGTGGACATCGATTCTGGTGATGCCAATAATCATCTTGCTGTGGTAGATTATGTTGAAGAACTCCATGACTACTACAGAAAGATGGAGAGTATTAGTTGTGTTGCTCCGAATTATATGGCACAGCAAGACGACATTAATGAAAGGATGAGGGCTATACTGATTGACTGGCTTATTGAGGTTCACGATAAATTTGACCTCATGCATGAGACTTTGTTCCTTACCATTAATCTCATAGATAGGTTTTTGGCAAAGCAGAACGTGATGAGAAAGAAACTTCAGCTGGTTGGCTTGGTGGCGATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTGCCCTTAGTAGGGGATCTGATCCTTATATCAGACAAAGCTTACACAAGGAAGGAAGTTCTCGAAATGGAGAAGTTGATTCTCAACACGTTGCAGTTTAACGTGTCAGTTCCCACACCATATGTTTTTATGAGGAGGTTCCTGAAGGCAGCTGAAGCAGACAAGAAACTTGAGCTAGCAGCTTTCTTCTTGATGGAGCTATCTCTTGTGGAATATGAGATGTTGAAGTTCCCGCCATCGATGCTAGCTGCAGCTGCAGTCTATACAGCTCAATGTACTACTTTTGGCTTCAAACAGTGGAGTAAGACGTGTGAATGGCATACCAACTTCTCGGAAGATCAGCTTTTAGATTGCTCAAGGATGATGGTTGAGTTCCACCAGAAGGCAGGGACAGGGAAGCTTACAGGGGTATACAGGAAGTACTGCTCATCCAAGTTCAGCTCCATTGCAAAATGTGAAACGACAAGTTTTCTTCTGGAGAACCGGTTGTAG 1290 0.4264 MVISDHNNPNLIKPTNFQGMGTRKFGNNRRALSVINQSIVDGRAYPCVVNKRALPDKYEICEKKQADPVHRPITRRFSAQIASTQQSHAEENKKANTLIPNGNEFVDVIFVDDEHKSPSDQPDHPVPMSLEQTEPTHDKVDQMEEVEMEDIIEEPIVDIDSGDANNHLAVVDYVEELHDYYRKMESISCVAPNYMAQQDDINERMRAILIDWLIEVHDKFDLMHETLFLTINLIDRFLAKQNVMRKKLQLVGLVAMLLACKYEEVSVPLVGDLILISDKAYTRKEVLEMEKLILNTLQFNVSVPTPYVFMRRFLKAAEADKKLELAAFFLMELSLVEYEMLKFPPSMLAAAAVYTAQCTTFGFKQWSKTCEWHTNFSEDQLLDCSRMMVEFHQKAGTGKLTGVYRKYCSSKFSSIAKCETTSFLLENRL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0036 429 FunFam G2/mitotic-specific cyclin 190 297 - -
Lele52g0036 429 Pfam Cyclin, C-terminal domain 304 419 IPR004367 -
Lele52g0036 429 SUPERFAMILY Cyclin-like 165 301 IPR036915 -
Lele52g0036 429 MobiDBLite consensus disorder prediction 114 136 - -
Lele52g0036 429 PIRSF Cyclin_A_B_D_E 5 429 IPR039361 -
Lele52g0036 429 CDD CYCLIN 205 294 IPR013763 -
Lele52g0036 429 ProSitePatterns Cyclins signature. 206 237 IPR006671 -
Lele52g0036 429 SMART cyclin_7 308 390 IPR013763 -
Lele52g0036 429 SMART cyclin_7 211 295 IPR013763 -
Lele52g0036 429 Pfam Cyclin, N-terminal domain 178 301 IPR006671 -
Lele52g0036 429 PANTHER CYCLINS 125 400 IPR039361 -
Lele52g0036 429 Gene3D - 177 417 - -
Lele52g0036 429 FunFam G2/mitotic-specific cyclin-1 298 416 - -
Lele52g0036 429 Gene3D - 190 302 - -
Lele52g0036 429 CDD CYCLIN 302 389 IPR013763 -
Lele52g0036 429 SMART Cyclin_C_2 304 421 IPR004367 -
Lele52g0036 429 SUPERFAMILY Cyclin-like 303 420 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0036 Lele-ChrLele52 240140 243627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0036 1 425 Core Cell Cycle Gene Families AT1G20610 56.651 2.61e-172 488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0029 49 200040 202694 Lele52g0036 52 240140 243627 hybridization
Lele50g0034 50 245776 249798 Lele52g0036 52 240140 243627 hybridization