Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0023 ATGGGAGGCTTATTGCGTATTTTTGAGTTCAATCAGGGGAGCATGGCCAAGAAAGTTCCTGCCCACAAGAGACGTCATGGTGCCCTGGAACCTCCTTGCAATAACCTGGAGCTTCAAGTTGAAGCATCTCAAATTCAATGCCCGGAAGGAGAATTACCGTATCATTATCAAGTAAAAGACTTGTCAGTGAATACTTGTCATTCAGATGCCTTTTCAGTGAAGAAACTGATCGATGATGAGATATGCCAAGGACCAACCACCAAGCCAAATGCACCGAGCCTTGTGGCAAGATTGATGGGGATAGATATGATGCCATCAGTTCCATCAGATGAAATAAAAGGTGAAAATATGGGGAAGAAGTTTTCAGTGAAGGAAGTGAATGGAAGGGGTTCGGGCTACTCAAATTCTTGCGGCCATATGAAATTTGACTCTTATTACCAAGACACAGATGATGATGATGATGGATGGAACCAATGTTTGGGAAAACCAAAGCCCCGGGAGCATCCTCAGGAAGAGGAACTACAGAAGTTCAAGAAAGAATTTGAAGCATTTCAGGCGGCAAGGTTAATGGAGTGTGCGAAGGTTGTTGACGTTGGCAATACCCCCAGACAATTGCTTGCACGAGAGAGCATGGGCAAGAAAAAGATTGCAGATCATGCAACTTCACATAAACTGGCTACAGTGTTACCAAATAATGGTATTCCTGCATATCATGGTAATATCAAGGAGTTATTTCCTACTAGGCACAAGGAAACCTTTCCTTCATGGAGCAGAACCTTAAGTAGAGACTTTGAGGAGTCCTTAATGATGAAATCGAACAGCCGACTGGATGGTTCTTCACCAACTCGAATAGTAATTTTGAAGCCTGGTCCTGATAGGATTTACAGCCATGAGGATAATTGGATCGATCCATCCAGCACTTTACAAGGGAGAAATAGCATAGAAGATTTTCTCAAAGAGGTCAGACAGCGGCTAAAATGTGAACTGCAGGGGAATACTTTTAAAAAGGGTTATGTGGTTCGGGGAATTGGGATTGAGACACCTTACAATGAAAAGCCATCATATCCTAAACAAATTGCTCGTAGCATAGCAAAGCAGGTCAGAGAAAGCGTGACAAGAGATGTTGCAACAAGTTTGCTCCGCTCGGAATCAACAAGATCATACAGAAGTGAAATTCAGTTCAATGGATCAAGTTCCCCAGAATTTATCAATAGAGATACCAGGAAACTCTTGTCAGATAGGCTAAGAAATGTTCTAAAAAGCAAAGCTTATCTTGATATTCCTGAAGTGACTTGCTGGAATTCAAGGTCGTATCTCTTAGATAATCACAATGACAGGTTAAAACAAGCTAATGATAATATGAATTTAAATGATTTGAGCCACTGGGAAATTTCAAAAGAGGAAAAAGAAATGCGAACAGGCTCTTTCAGGTGTGAACCAGTTGACAATATATCGCTCCCCAAAGAATTGTCCCCTAGAAACCTTGTTAGATCCTTGTCTGCTCCTGTATCAGGAACATCATTTGGAAAGCTTCTTCTTGAGGACCGCCATATTTTAACTGGTGCCCAAATTCGGAGGAAGCTTGAAGCTATTGAAACTGTGTCTGTTAATGTTAAAAGGAAAAAGAAGGATAGATTTAACATTAAGGAAAAGGTTTCCAATTTTAGATATAATCTTGTCCTAAGAGGGAAGCTGTTCGGAAAAAAATTTCAATCAATGGCGGAATCACATAGCAATGAAGATGGTCCCATGATGGGAGATGTTACAAGTGGACCAACAGTTCTTTTGAATTGTGGTGAGAGGCATGAGAACTCCACTGAGGTCCCTCCCAGTCCTGCATCTGTATGCAGCAATGCTCAAGAAGAGATATGGAAGCGAGCTGAATATTTAAGTTCAATTTCAACTCCGGATGTATCTTCAAGAGAAAGTAACGTTATGCCAGAGGCTTTTAGAGAAATTAGCTCCGGTTTGAATGAGTTAAGGAGGCAGATAAATCAACTTGAGTCTGATGGCCCTGAGAAATTAATGGTCAAACAGGAGCCTGAAGAATCTGAGTTGGCACAATTAGAGGATCCAGCAGAATCTTACATAAGAGATCTGCTTGTTTCTTCTGGTCTATACTTCGGTTCATGGGATAAATCCTTAATAAAAGGGGACACATTTGCAAAGCCTATTGGGAACTCTGTTTTTGAAGACGTGGAGGAGTCTCATAACAAAATGCTCAAGGAGGACGAAACTTGTACCAAGGATCAAAGTGACAATAAGTTAGAGCACAAGCTATTGCATGATTTGCTAAATGAATCACTTGTCATTGTTCTTGGACCACCTTTAACGTTGTCTAGATTCAGAAGGAAACTATGCAGTTCCTCCTCCACGCCGCGGCCACCACCACGTGGGAAGGAACTTCTGAAGTTAGTATGGGAAATCATCAGATTTTCCTTATATCCACCGTCTGACATAACTTCTGATTCACTTGATACGTGGGTGGCCAGAGACCTGGGATCCAACCCCTGGGTTGGATTGATAGACGATGAGCTTCATATACTGGAAAGAGAAATAGAACGTCTGGTTACTGAAGATCTGGTTGAAGAACTCATGAGGGATATGATATGCTCTTAG 2619 0.4154 MGGLLRIFEFNQGSMAKKVPAHKRRHGALEPPCNNLELQVEASQIQCPEGELPYHYQVKDLSVNTCHSDAFSVKKLIDDEICQGPTTKPNAPSLVARLMGIDMMPSVPSDEIKGENMGKKFSVKEVNGRGSGYSNSCGHMKFDSYYQDTDDDDDGWNQCLGKPKPREHPQEEELQKFKKEFEAFQAARLMECAKVVDVGNTPRQLLARESMGKKKIADHATSHKLATVLPNNGIPAYHGNIKELFPTRHKETFPSWSRTLSRDFEESLMMKSNSRLDGSSPTRIVILKPGPDRIYSHEDNWIDPSSTLQGRNSIEDFLKEVRQRLKCELQGNTFKKGYVVRGIGIETPYNEKPSYPKQIARSIAKQVRESVTRDVATSLLRSESTRSYRSEIQFNGSSSPEFINRDTRKLLSDRLRNVLKSKAYLDIPEVTCWNSRSYLLDNHNDRLKQANDNMNLNDLSHWEISKEEKEMRTGSFRCEPVDNISLPKELSPRNLVRSLSAPVSGTSFGKLLLEDRHILTGAQIRRKLEAIETVSVNVKRKKKDRFNIKEKVSNFRYNLVLRGKLFGKKFQSMAESHSNEDGPMMGDVTSGPTVLLNCGERHENSTEVPPSPASVCSNAQEEIWKRAEYLSSISTPDVSSRESNVMPEAFREISSGLNELRRQINQLESDGPEKLMVKQEPEESELAQLEDPAESYIRDLLVSSGLYFGSWDKSLIKGDTFAKPIGNSVFEDVEESHNKMLKEDETCTKDQSDNKLEHKLLHDLLNESLVIVLGPPLTLSRFRRKLCSSSSTPRPPPRGKELLKLVWEIIRFSLYPPSDITSDSLDTWVARDLGSNPWVGLIDDELHILEREIERLVTEDLVEELMRDMICS 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0023 872 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 870 - -
Lele52g0023 872 Pfam DUF761-associated sequence motif 82 107 IPR032795 -
Lele52g0023 872 Pfam Domain of unknown function (DUF4378) 695 864 IPR025486 -
Lele52g0023 872 Coils Coil 650 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0023 Lele-ChrLele52 164013 167781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0023 73 871 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 39.758 1.17e-149 456
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0023 52 164013 167781 Lele53g1234 53 21008539 21011223 CCT
Lele52g0023 52 164013 167781 Lele54g1206 54 17638956 17641320 CCT
Lele52g0023 52 164013 167781 Lele55g0252 55 1530731 1533410 CCT
Lele52g0023 52 164013 167781 Lele56g0904 56 7692298 7720369 CCT
Lele49g0019 49 126675 130493 Lele52g0023 52 164013 167781 hybridization
Lele50g0022 50 176244 180011 Lele52g0023 52 164013 167781 hybridization