Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0022 ATGTTTCTTCCCCGGCCCTGGCTGAACGTCGACTTCCGAACACAAACCTCAGCAATTCTTATTGAAATCGCGCCATGGCCGGGTCACAAACCAATACCAACATTTTCCTTAGTTGCCGCTTTCTTTTTTCTTTCTTTGCGCTTGCAATTCTCTTTTGGTGAACGCGGTGAACAGGTCGGTGGCATTCCCATAAGGCCTTTGCCCGAGGATGTTCGTAGTTCATTGAGTTCTGGCATTTTCTTGTTCGACTTGACCAGGGTTGTGGAAGAACTGGTTTTCAATAGCCTGGATGCTGGCGCAACCAAGTGTTCTGATCTCAAATCACCTCTGAATTCTGAGTATCCGATGTTTATCTTCTAGTTTAACAACATTCTCTATTCTGTTCCCTATAGTGAGGATGAACTTCTCTGCACACATTCTTCTTCTCCGCTGTCACTTTTAACCAGCCTTGCAGTATATCTGTATCCATGTGATGTGAATATTAACTCACAGTTCATCAGCAAAGGCCCAATTCATAAGCTTCTGAGTCAACTGGCTGTTAGGTTTGAGCATCTGGACTCACGGAATGCAGGTGACAAGTTCCAGAGCAAGAAGAGAAGTAGATCTCAAGCATATCCAGCTTATATCTTGAATTTGCTTTGCCCACGGTCTCTGTATGATTTAACCTTTGAGCCATCAAAGACTTCTGTTCAATTTAAGGATTGGGCTTTTATACAGACCGTAAAACATTTCTGGGGGAAGAGCATAACTCATGAGGGAAATAAATTTCTTGAAGTTGATGATGATATGCTCAGTGAATCATCCCAAGGTGCCTTGCATTATGGCTGTTGTGAGCTCTGTAATGATGTAGAGATTGACAGGAATTTTCAAAAGCCTTTTCTGAAGAGTTGCTCTATACGAGGTAGTATTCTGCGTGAGAAGGCCTTGTTTGCAAATGATGAACATGAGTTTCAAATTGATGGCTATAGCACCAAACAAGATCTGGGAGTATGCAGTGGTACAGTTGAGAACTTAGGTGCCCATCCCTGTCCAGAAGTTGCCGAAATATTTAACGCATCTAGAGATTCTGTTTTTCTGTCAAGAGCATCTCCTGAAGAAAAATGTTTTCCTTCAGATTCATGCTCCTTTGCAACACAAATGGGATGCCCTGGGTCTGCTGCAGAAAAATGTTTTCCTTCAGATTCAAGCTATCCAGAGTTATTGACATCAGAACGCTACCCCATCTTCAAGGCACAGTTACCTGAAGCCACTGCATGGGATGTTGATCATATGACAGGCACTGATCTTGATGTTCTTGGAGGAATACCTAGATGCTACAAATGGGGTGGTTATAAAAGAATTTTAGATGATAAAGAAAATAGATGCAATTTTAGCTGTGATATCTCATACAGCTTCAACTCAGATCAGTGCGTGAGAAGTTTTGGAAACAATAGATTGTATTTTGATGGTCCCAATAACTCTAATAATTTAAATTTTACCAAGTGGCCAGATCCTAAGTTAGTCAAATGGCCTGATTGTTATGATATAGATTCGAACAAATGGTCGAATGTTTCAACAGATGAGTCAGATTGGTTGTGTCCAGGGTCATGTGGTGGAAACTACCAAAGGCTTAGCAAGAACAGAATCAAAAAGGACCATGTTAGACACCCAGCTCCAGAAAAGAACCATGAAAGATCTAGAAGAAGCTTTTCAGCCCCTCCATTTCACAAAAGCAGAAGGTTTAATTCTTTAAATCAACCTTTAACAATGATAGCCAAAAGACCTGAGGGCCAAACCTCCAACTTTGCTTTAAAAAATAGAGAATTGACCTCAAGAAAAGTGGAAGATTCTATGGATTCCAGGACAAAATGGCGGAACTACTTGCCTCAAATTCCAGTTCTGTTTCCAATCTTCAGAGGCCTAACAAGGGATAAATCACTTGATTTTCATTGTCAAGATGATATACTTGACACATCTTCTGGATTCTTGCACCTTGCTGGTGATTCTTTAGTACCCGAAACTACCGGTAAGAACTACCTTAAAAATGCCAGAGTTCTTCATCAGGTGGATAAGAAATTCATTCCAGTTGTGGCCGGCAGAACCCTTGCTGTTATTGATCAGCATGCTGCAGATGAGAGAATCAGATTGGAAGAATTACGTCAAAAGGTATTATCAGGAGAAGCAAGGACAATTACCTATCTAGATGCTGAACAGGAACTGGTATGGGTCCTTTTTCATGAGAGGATCTTCGAAACACTTTCACTTGCCATGAATTTGGATATTCTCTACAGGCAGCGAGCTGTTGTTGCCCTCATTTTGGTGAAAAACTGCCGCCTCCTTGTACCCTGCATTTTAGGTGTCAACTTATTTGATATTGATCTTATGGAATTTCTTCAGCAGAGGTATGTGCTTTGTCTCAGTAGCTATTTTAATTTCATGCTCATGAGCTTGGAAATCCTGAGCATCTTTATCCTAAATTCTATCTTATGTGGTGAGGGAAATGTATGGGGATTGCGGTCGTCAACAATACTGTTTATTTTATCAATACTTCATTGTGAAGGTGCAATTTTGTTTGGAGACTCGTTGCTGCCATCTGAATGTTCGCTCATTGTTGAAGAGCTAAAGCAAACGTCACTGTGTTTCCAATGTGCTCACGGGCGACCAACTACTGTTCCTCTCGTCAACTTGGAGGCGCTGCATAATCAGATAGCCAAGCTTCGACCAATGATCGATTGCTCAAATGATGGGTGGCATGGACTACGAAGACATGAAGTTAGTGCTGAACGTGCTGCACAACGTTTATGTTCCTCTGAAGAATAG 2799 0.4137 MFLPRPWLNVDFRTQTSAILIEIAPWPGHKPIPTFSLVAAFFFLSLRLQFSFGERGEQVGGIPIRPLPEDVRSSLSSGIFLFDLTRVVEELVFNSLDAGATKCSDLKSPLNSEYPMFIFXFNNILYSVPYSEDELLCTHSSSPLSLLTSLAVYLYPCDVNINSQFISKGPIHKLLSQLAVRFEHLDSRNAGDKFQSKKRSRSQAYPAYILNLLCPRSLYDLTFEPSKTSVQFKDWAFIQTVKHFWGKSITHEGNKFLEVDDDMLSESSQGALHYGCCELCNDVEIDRNFQKPFLKSCSIRGSILREKALFANDEHEFQIDGYSTKQDLGVCSGTVENLGAHPCPEVAEIFNASRDSVFLSRASPEEKCFPSDSCSFATQMGCPGSAAEKCFPSDSSYPELLTSERYPIFKAQLPEATAWDVDHMTGTDLDVLGGIPRCYKWGGYKRILDDKENRCNFSCDISYSFNSDQCVRSFGNNRLYFDGPNNSNNLNFTKWPDPKLVKWPDCYDIDSNKWSNVSTDESDWLCPGSCGGNYQRLSKNRIKKDHVRHPAPEKNHERSRRSFSAPPFHKSRRFNSLNQPLTMIAKRPEGQTSNFALKNRELTSRKVEDSMDSRTKWRNYLPQIPVLFPIFRGLTRDKSLDFHCQDDILDTSSGFLHLAGDSLVPETTGKNYLKNARVLHQVDKKFIPVVAGRTLAVIDQHAADERIRLEELRQKVLSGEARTITYLDAEQELVWVLFHERIFETLSLAMNLDILYRQRAVVALILVKNCRLLVPCILGVNLFDIDLMEFLQQRYVLCLSSYFNFMLMSLEILSIFILNSILCGEGNVWGLRSSTILFILSILHCEGAILFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHNQIAKLRPMIDCSNDGWHGLRRHEVSAERAAQRLCSSEE 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0022 932 SUPERFAMILY DNA mismatch repair protein MutL 676 718 IPR037198 -
Lele52g0022 932 MobiDBLite consensus disorder prediction 543 573 - -
Lele52g0022 932 Gene3D - 159 250 IPR014721 -
Lele52g0022 932 MobiDBLite consensus disorder prediction 546 564 - -
Lele52g0022 932 Pfam MutL C terminal dimerisation domain 677 719 IPR014790 GO:0005524|GO:0006298
Lele52g0022 932 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 63 102 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Lele52g0022 932 Gene3D - 834 898 IPR042120 -
Lele52g0022 932 Gene3D - 673 741 IPR042120 -
Lele52g0022 932 Gene3D - 62 105 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0022 Lele-ChrLele52 150438 157066 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0018 49 116378 124511 Lele52g0022 52 150438 157066 hybridization
Lele50g0021 50 167248 169542 Lele52g0022 52 150438 157066 hybridization