Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0017 ATGATGGAATGGTCGCCCCACTTATTCGAGGCTAGTGAAGAGACAGTGACGGACGTGTTTAGCAAGGGGACACATGTTGAGGTTAGCAGTGATGAGGAAGGTTTTGTAGGAGCTTGGTTTGCTGCTACTATTGTTGAACCAAAGGGAAAAGATAAGTTTCTTGTTGAGCACCTGAACCTACGGACTGATGATGATTCAGAGTTTTTGAAAGAGGAAGTTGATATCTTACATATTCGGCCTTATCCGCCAGAACATGTTTGTGATCAGTTTAAACTTCTTCAAGAAGTTGATGCTTTATACAATGACGGATGGTGGGTTGGAGTGATTTCCCAAGTTATTAGCAACTCAGGGTATGTAGTATACTTCAGGAACACTAATGAAGAATTAGAGTTTGCAGAGTTAAGGCTACATCAGGAATGGATCAACGGAAAATGGGTCATTGCTTCTAAGGATGAACCAGAAGGTTGA 468 0.4167 MMEWSPHLFEASEETVTDVFSKGTHVEVSSDEEGFVGAWFAATIVEPKGKDKFLVEHLNLRTDDDSEFLKEEVDILHIRPYPPEHVCDQFKLLQEVDALYNDGWWVGVISQVISNSGYVVYFRNTNEELEFAELRLHQEWINGKWVIASKDEPEG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0017 155 Pfam Agenet domain 23 83 IPR008395 -
Lele52g0017 155 Gene3D - 9 91 - -
Lele52g0017 155 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 16 151 - -
Lele52g0017 155 SMART agenet_At_2 18 86 IPR014002 -
Lele52g0017 155 SMART agenet_At_2 88 142 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0017 Lele-ChrLele52 125423 126696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0017 30 140 PHD Transcription Factor Family AT5G58610 28.358 1.93e-09 53.5