Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0015 ATGATGGGGGTTTGGTTTGTGGGGTTGATGCTTCTGTTCCATGGATTCTCTCTGACCGTGGCTGGCTCGAATCATTCCCCGAGACCCGATTCTGTAAATATTGGGGTTCTCTACTCTTTCAACACCACTGTCGGTCGAATTGTAAAGATTGCAATAGAAGCTGCAATTGAAGATATAAATTCTGATCCATCCATCCTTGGTGAAACTAGGCTCAAAGTCTCAATGCAAGAGGATTCCAAATACAGAGGCTTTCTGAGCATTGCCGAGGCCTTGCGTCTCACTGCGAAACACACGGTAGCTATAATTGGCCCGCAAACCTCCGTCACAGCTCATGTGATATCTCACATTGCAAACGAGCTCCGAGTCCCTCTGCTATCAGTTTCTGCATCGGACCCCACGCTCTCTTCCCTTCAATTCCCATTCTTTGTGAGAGCTTGTCATAGTGATCTTTATCAGATGGCCGCAATTGCAGAGCTTGTGGACCACTATGGGTGGAGAGAGGTCATTGCCATCTATGTTGACGATGATCACGGAAGAAACGGGATTAGTGTATTAGGAGATAAGCTCGCTGAGAGACGATGTAGGATCTCTTTTAAAGCCCCTTTGAGCCCTGAAGCAACTAAGGAGGAGATTACTAATGTGCTTGTTCAGGTGGCCTTGGCAGAATCTAGGATAATAGTTGTACACATCAATGCCGCATGGGGCCCCAAGGTGTTTAGAGTGGCAAAGTATCTCGGAATGATGGGATCTGGGTACGTTTGGATAGCCACTGTTTTTCTCTCTGCTCATATGGATACAAATGGTCCACTCCCTCACGATACAATCGATACGATTCAAGGGGTTCTTACGCTGCGAACCTACACGCCTGATTCAGAGCTTAAACGAAGATTTGTTTCCAGGTGGAAAAACTTGACTCGTGCCAACAACACTGCTCAAAGAGATGCTCGCCTTGGATTGAGTACTTTTGGCCTCTACGCATATGATACTGTTTATGTGCTTGCTCGTGTGCTTGATAGTTTCTTCAAACAAGGGAATCGAATAACATTCTCGTACGATCCCAAGTTGTCTGAGCTGCGCGGCGACAACTTGAACCTTGACTCTGTGAGCATATTCGATCAAGGAAACGTGTTGAGAGAAAGTATCTACAAGATTGATATGAAAGGGGTAACTGGTACTTTCAAGTATACATCTGACGAAAACCTCGTTAATCCGGCATATGAAATCCTCAATGTGATCGGGACAGGATCCAGGAGGATTGGTTATTGGAGTAACTACACTGGATTATCAGTTGTTGCTCCAGAAGTACTCTATGCACACCCGCCCAATCGTTCAGCGGCGAGTCAGAAGCTACGGCCAGTGATTTGGCCAGGGGACACAGAGCAGAAGCCTCGGGGTTGGGTTTTTCCAAACAACGGGAGGCTCTTAAATATCGGAGTGCCAGTGGGATTTAGTTACCGTCAATTCGTGTCGCAGGTACAAGGCACTGACATGTTCAAGGGCTTCTGCGTCGATGTATTTCTCTCTGCACTGAACTTGCTGCCTTATGGCGTACCTTATAGGCTTGTTCCATTTGGGGATGGTCACAGCAATCCTGATAACAACGAGCTTGTTCGTTTGATCACGGCGGGAGTCTATGATGGAGCAGTTGGTGACATTACAATTACGACGGAGCGAACGAGGATGGTAGATTTCACTCAGCCATTCATAGGGTCTGGTCTAGTGGTCGTAGCCCCGGTTAGGAAGTCAGACTCCAGTGCTTGGGCCTTTATGAGACCCTTTAGTCCGAAGATGTGGGGTGTCACGGCTATCTTTTTCCTTGCCGTTGGAGCTGCTGTTTGGATATTGGAGCATAGATTGAATGATGAGTTCCGGGGACCTCCCAGAAAACAATTAGTTACAGTTTTGTGGTTCAGTTTTTCAACCATGTTTTTCGCCCACAGGGAAAATACAGTGAGCACTCTCGGTCGATTTGTGCTTCTGATATGGTTATTTGTGGTTCTTATAATAAACTCGAGCTACACGGCAAGCCTGACTTCAATCCTCACAGTGCAGCAGCTTTCTTCTCCCATTAAAGGCATTGAAACTTTAGTCGCTAGCAAGGAGCCTATTGGGTACCTGGAGGGTTCTTTCAGTAGGGACTATCTAATACGAGAAATTGGAATTGATGAATCAAGACTGGTCCCGCTAAAGACGCCAGAAGAGTCTGCTCAAGCATTAAGGGATGGTCCCAAAAGGGGCGGTGTTGCGGCGTACGTGGATGAGCGTGCTTACATTGAACTCTTCCTTTCGAGCCGCTGTGAGTTCACCATAGTAGGTCAAGAGTTTACCAGAAACGGTTGGGGATTTGCATTTCCACGAGACTCGCCTCTGGCGGTAGACATATCGACGGCTATATTGAAATTGGCGGAGAATGGAGATCTGCAGAGGATTCATGACAAATGGCTGCTGAATATCGCGTGCCTGTCACAGAATACAAAGTTTGAAGTGGACAGGCTTCGTCTGAAAAGCTTCTGGGGGCTGTATCTAATATGCGGGGTGGCGTGCTTACTTGCCCTTATGGTATATGTGATAATGACGATGAGGCAGTACAAGAAGCACTACGTGGCGGAGGTGGAGTCATGTGCGGGATCCTCTTCCAGCATTCGGACCTTCCTCACATTTGCTGACCAGAAAGACGCAGAAGTGAAAAGCCGATCCAAGAGAAGGCAAATGGAGAAGCTCTCAAGTGCTGGCGGATCTAACGGTGAATACGCGCTCTCGTCTTCCATCAGAAGCATACATTCTGGCGCCGAAGCCTGA 2799 0.4748 MMGVWFVGLMLLFHGFSLTVAGSNHSPRPDSVNIGVLYSFNTTVGRIVKIAIEAAIEDINSDPSILGETRLKVSMQEDSKYRGFLSIAEALRLTAKHTVAIIGPQTSVTAHVISHIANELRVPLLSVSASDPTLSSLQFPFFVRACHSDLYQMAAIAELVDHYGWREVIAIYVDDDHGRNGISVLGDKLAERRCRISFKAPLSPEATKEEITNVLVQVALAESRIIVVHINAAWGPKVFRVAKYLGMMGSGYVWIATVFLSAHMDTNGPLPHDTIDTIQGVLTLRTYTPDSELKRRFVSRWKNLTRANNTAQRDARLGLSTFGLYAYDTVYVLARVLDSFFKQGNRITFSYDPKLSELRGDNLNLDSVSIFDQGNVLRESIYKIDMKGVTGTFKYTSDENLVNPAYEILNVIGTGSRRIGYWSNYTGLSVVAPEVLYAHPPNRSAASQKLRPVIWPGDTEQKPRGWVFPNNGRLLNIGVPVGFSYRQFVSQVQGTDMFKGFCVDVFLSALNLLPYGVPYRLVPFGDGHSNPDNNELVRLITAGVYDGAVGDITITTERTRMVDFTQPFIGSGLVVVAPVRKSDSSAWAFMRPFSPKMWGVTAIFFLAVGAAVWILEHRLNDEFRGPPRKQLVTVLWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIETLVASKEPIGYLEGSFSRDYLIREIGIDESRLVPLKTPEESAQALRDGPKRGGVAAYVDERAYIELFLSSRCEFTIVGQEFTRNGWGFAFPRDSPLAVDISTAILKLAENGDLQRIHDKWLLNIACLSQNTKFEVDRLRLKSFWGLYLICGVACLLALMVYVIMTMRQYKKHYVAEVESCAGSSSSIRTFLTFADQKDAEVKSRSKRRQMEKLSSAGGSNGEYALSSSIRSIHSGAEA 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0015 932 Pfam Ligand-gated ion channel 816 848 IPR001320 GO:0015276|GO:0016020
Lele52g0015 932 FunFam Glutamate receptor 148 307 - -
Lele52g0015 932 FunFam Glutamate receptor 586 716 - -
Lele52g0015 932 CDD GluR_Plant 475 815 - -
Lele52g0015 932 Gene3D - 586 707 - -
Lele52g0015 932 Coils Coil 930 932 - -
Lele52g0015 932 FunFam Glutamate receptor 470 586 - -
Lele52g0015 932 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 326 338 - -
Lele52g0015 932 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Lele52g0015 932 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Lele52g0015 932 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 237 260 - -
Lele52g0015 932 SUPERFAMILY Periplasmic binding protein-like II 453 816 - -
Lele52g0015 932 SUPERFAMILY Periplasmic binding protein-like I 27 467 IPR028082 -
Lele52g0015 932 CDD PBP1_GABAb_receptor_plant 33 432 IPR044440 -
Lele52g0015 932 Gene3D - 148 428 - -
Lele52g0015 932 MobiDBLite consensus disorder prediction 896 917 - -
Lele52g0015 932 Gene3D - 785 815 - -
Lele52g0015 932 Gene3D - 50 403 - -
Lele52g0015 932 PIRSF IGluLR_plant 1 927 IPR017103 -
Lele52g0015 932 Gene3D - 475 585 - -
Lele52g0015 932 Gene3D - 735 784 - -
Lele52g0015 932 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 889 - -
Lele52g0015 932 Pfam Receptor family ligand binding region 49 413 IPR001828 -
Lele52g0015 932 Pfam Bacterial extracellular solute-binding proteins, family 3 532 815 IPR001638 -
Lele52g0015 932 FunFam Glutamate receptor 712 819 - -
Lele52g0015 932 SMART GluR_14 476 817 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0015 Lele-ChrLele52 119962 123194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0015 5 913 Ion Channels AT3G51480 59.190 0.0 1136