Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0010 ATGCAGGTGCACCCAATTAAATATTACAGCATTTCCTCGTGCTTTACTGCCATATTAAGAGAACAAGGTCCTTCTGCCCTCTGGAGAGGTTGGGCCGGCAAGTTCTTTGGATATGGGGCTCAAGGGGGCTGCAGATTTGGCCTCTATGAATATTTCAAGGAACTTTATTCCAATATAATGGGAGACTGTAATAGGAGTGTGGTTTACTTTGTTAGTAGCGCATCTGCTGAAGTATTTTCCAATATAGCTCTATGCCCTTTTGAAGCTGTTAAAGTGAGAGTGCAGGCACAGCCCTGTTTTGCAAAGGGGCTGTTTGATGGCTTTCCAAAGTTATTCTACAGTGGGCTTATTCCTCTTTGGGGCCGAAACCTTCCATTTTCCGTGGTTATGTTCTCAACATTCGAGCATTCTGTTGATTTATTGTATCGTAAAGTTGTTAAGAAAAGAAAAGAGGATTGCTCAATAACTCAACAACTAGGGGTGACATGTTTAGCTGGATATGCTGCTGGGTCTGTTGGTAGCTTGATGTCGAACCCAGCTGACAATATTGTAGCTTCGCTTTATAACAGAAAGGCTGATAGTGCATTTTTGAGAAAACAAATGTATAATTCGATAAAAGAGGAAATTGGTCCAAACTACCTAGAACAATTTCAGTTCACAAATTCTGGGTTTCAGATGAGGATTCTTTATCCAAAGATAATCACAGCATTAGAGGCCTGA 720 0.4097 MQVHPIKYYSISSCFTAILREQGPSALWRGWAGKFFGYGAQGGCRFGLYEYFKELYSNIMGDCNRSVVYFVSSASAEVFSNIALCPFEAVKVRVQAQPCFAKGLFDGFPKLFYSGLIPLWGRNLPFSVVMFSTFEHSVDLLYRKVVKKRKEDCSITQQLGVTCLAGYAAGSVGSLMSNPADNIVASLYNRKADSAFLRKQMYNSIKEEIGPNYLEQFQFTNSGFQMRILYPKIITALEA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0010 239 SUPERFAMILY Mitochondrial carrier 1 193 IPR023395 -
Lele52g0010 239 Pfam Mitochondrial carrier protein 67 144 IPR018108 -
Lele52g0010 239 Pfam Mitochondrial carrier protein 8 57 IPR018108 -
Lele52g0010 239 Gene3D Mitochondrial carrier domain 1 224 IPR023395 -
Lele52g0010 239 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 55 IPR018108 -
Lele52g0010 239 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 236 IPR044677 GO:0005315|GO:1990547
Lele52g0010 239 ProSiteProfiles Solute carrier (Solcar) repeat profile. 64 140 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0010 Lele-ChrLele52 87542 89868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0010 1 196 Chloroplast and Mitochondria Gene Families AT2G17270 63.235 4.73e-98 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0010 52 87542 89868 Lele52g0010 52 87542 89868 ECH
Lele49g0008 49 70200 74713 Lele52g0010 52 87542 89868 hybridization
Lele50g0011 50 111973 114671 Lele52g0010 52 87542 89868 hybridization