Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1686 ATGTCTCAGACATCCAGGGTCCCACCTGCGATTCAATCTATCAAATCAATGCCATATGAGTTCAAGTTAACAGGTAATCCAACCCCTGATCTTCTGGTAAAAAGTCTAAATGTTGAAGTGGGAAGCATCAATGTAATATCAACACGTAGTCCTGAAAATGGTGCGATAGGAAGGAAGGTTTCTGAGGAACTTCAGGACTGTGCTGGCGACATGGATTTCATCAATGAGGACTCTCCATATGGTGAGAAAAACACATCACTTGAAAGTAGGCACTCAAGTGGTGATGCAGAAGTTGATCCTATACCTCTGCCCCTTTCTTCAATCTCAAAATCTTCCTGGGAACGCAGGTGGAGTGATACAACACCTTATGCTTCAAAAATGAAGCTTCAGTCATGGTTTCAACTTCCAAATGGAAATTGGGAGATGTGTAAGATTATATCAACTTCTGGAACTGAATCTGTTATTTCCCTGCCTGATGGGAAGGTTTTAAAGGTGAAAGGTGAAAGTGTGGTACCGGCAAATCCTGATATTCTTAATGGTGTGGATGATCTGATGCAACTTAGTTATTTAAATGAACCTTCGGTTTTATACAATTTGCAACATAGATACTATCAAAATATTATTTATACAAAAGCTGGGCCAGTTTTGGTTGCTGTAAATCCCTTTAAGAAAGTTCCTTTGTATGGAAACAATTATATTGAAGCATACAAGCGTAAAACAATTGAAAGCCCTCATGTATATGCCATTACAGACGCAGCTATTCGGGAAATGATACGAGATGAAGTAAATCAATCCATTATTATAAGTGGTGAAAGTGGAGCTGGAAAAACTGAGACAGCAAAGATAGCAATGCAGTACTTGGTTGCTCTGGGAGGTGGAAGTGGAATAGAGTATGAGATATTGAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAGACATTGAGAAATGACAACTCAAGTCGTTTTGTAAGATCCACACTCGTCATATTAAATCTCTTAGTTGATCTTTTCTCAAGTGTACTGAGTAATGGTTCTGTTCATGTTAATTTTGCTGGAAAAGAGGAATTTGGCATAGTCATGGAAGCTTTGGATGTTGTCCACATTAGTAAAGAAGACCAGGAGAATGTATTTGCAATGATTGCTGCAGTACTATGGCTAGGAAACATATCTTTTACTGTAATTGATAATGAAAATCATGTTCAAGCTGTAGAAGACGAGGCTTTGTTCAACGTCACCAAATTGATAGGCTGTGACATTGGAGATCTTAAGTTGACTTTATCAACTCGCAACATGAAAGTTGGTAATGATAATATTGTTCAAAAGTTGAAGCTATCGCAGGATGGTTTCAAGCCTATATATTATAGGACCTTGGGTGGGGACTTGAGTGCTTCCGTGCAGGCCATTGATGCTAGAGATGCCTTGGCAAAGTCAATATATGCCTGTCTGTTTGATTGGTTGGTGGAGCAAATAAACAAATCGCTTGCTGTTGGCAAAAGGCGTACAGGCAGATCAATCAGTATTCTAGATATATATGGGTTTGAATCATTTGATTTTATTGCAAATAACCTAGTTCATGGGGATACTATTGTTCATTCAACACTTCAATCATCATTTATTCAAGATAGAACAAAAGTTATGCATGTCATGTTTGGTTTCTGTATATACTGTGGAATTACTAATTTGTGTGCGTGTGTGGATCTGAGGTTATCATCAATAACCTAG 1728 0.3814 MSQTSRVPPAIQSIKSMPYEFKLTGNPTPDLLVKSLNVEVGSINVISTRSPENGAIGRKVSEELQDCAGDMDFINEDSPYGEKNTSLESRHSSGDAEVDPIPLPLSSISKSSWERRWSDTTPYASKMKLQSWFQLPNGNWEMCKIISTSGTESVISLPDGKVLKVKGESVVPANPDILNGVDDLMQLSYLNEPSVLYNLQHRYYQNIIYTKAGPVLVAVNPFKKVPLYGNNYIEAYKRKTIESPHVYAITDAAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLVALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFVRSTLVILNLLVDLFSSVLSNGSVHVNFAGKEEFGIVMEALDVVHISKEDQENVFAMIAAVLWLGNISFTVIDNENHVQAVEDEALFNVTKLIGCDIGDLKLTLSTRNMKVGNDNIVQKLKLSQDGFKPIYYRTLGGDLSASVQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFDFIANNLVHGDTIVHSTLQSSFIQDRTKVMHVMFGFCIYCGITNLCACVDLRLSSIT 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1686 575 Pfam Myosin head (motor domain) 181 325 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele51g1686 575 Pfam Myosin head (motor domain) 353 520 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele51g1686 575 PRINTS Myosin heavy chain signature 209 228 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele51g1686 575 PRINTS Myosin heavy chain signature 506 534 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele51g1686 575 PRINTS Myosin heavy chain signature 263 288 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele51g1686 575 PRINTS Myosin heavy chain signature 305 332 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele51g1686 575 Gene3D Myosin VI head, motor domain, U50 subdomain 371 525 - -
Lele51g1686 575 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 126 175 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele51g1686 575 PANTHER MYOSIN 172 325 - -
Lele51g1686 575 ProSiteProfiles Myosin motor domain profile. 179 575 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele51g1686 575 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 520 IPR027417 -
Lele51g1686 575 SMART MYSc_2a 173 575 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele51g1686 575 Gene3D Kinesin motor domain 131 365 IPR036961 -
Lele51g1686 575 MobiDBLite consensus disorder prediction 74 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1686 Lele-ChrLele51 17898136 17905592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1686 6 519 Myosins gene family AT1G50360 56.637 0.0 580