Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1685 ATGGTGGTTAGAAAGATGACGATGGAAGACACCATAAGGATGACAGCAACAGTGGACAATGGTGACAAGGACGGCAGTGGCGGATTATGGTATGGCATTGACTGGGCAAAAGTTGAATTTGAAGATAACCAAGACTGCCTCAATCTTTTTGAAAAGAAACCACTGGGATTACTATCTCTGTTAGATGAAGAGTCCACTTTCCCTAATGGCACAGATCTGACATTTGCTAACAAACTCAAGCAACATTTGAATTCTAATTCATGTTTCAGAGGAGAGCGAGACAATGCTTTTACTGTGTCGCACTATGCTGGGGAGGTCATATACGACACAACTGGATTTCTAGAAAAAAACAGGGATCTATTGCACTTGGATTCCATTCAACTTCTATCGTCATGCAGGTGTCATCTTCCTCAGATATTTGCATCCTTTATGCTTACTCAGTCTGAGAAGCCCGTTGTTGGTCCCTTACACAAGTTAGGCGGAGCTGATTCCCAAAAGCTAAGTGTCGCAACAAAGTTCAAGGGTCAACTGTTCCAACTGATGCAAAGGTTGGAGAGCACAACCCCACATTTTATTCGCTGTATTAAGCCCAATAACACGCAGTCTCCAGGATTATATGAGCAAGGACTTGTGCTACAGCAGCTAAAATGTTGTGGGGTACTAGAAGTGGTTCGAATATCAAGATTGGGCTTCCCTACTAGGATGTCTCACCAAAAGTTTGCCAGAAGATATGGTTTTCTTCTCATTGAGAATGCTGCATCTCAGGATCCACTTTGTGTTTCAGTTGCAATTCTTCATCAGTTTAATATTTTGCCTGATATGTATCAAGTTGGTTACACAAAATTATTTTTCCGAACAGGCCAGATTGGAGTGTTTGAAGATACTAGAAATCGCACCCTCAATGGCATTTTACGTGTCCAAAGTTGCTTCAGGGGTCACCAAGCTCGGGGTTACCTTAAGGAACTTCGCAGAGGAATCACTACTCTTCAGTCATTTATTAGGGGAGAGAACATCAGAAATGAATATGCAGCTTCACTTCAGAGACATCAAGCTGCTGTCCTTATACAAAAGCGGATGAAAGCAATATTTGTAAGAAGCAGAATGAAGAATACTAATGAAGCTGCAATTGTTATACAATCAATCATTCGTGGCTGGTTAGTCAGAAGATGCTCAGGAGATTTAGGATCATTGAAATCTGAAGGCATGAAGACAAATGAGTCGGATGAGGTACTGGTCAAGTCTTCTTTCTTAGCTGAATTACAGCGTCGGGTGCTCAAGGCAGAAGCTGCACTGAGAGAGAAAGAAGAGGAAAATGACATCCTCCACCAACGTCTCCAACAGTATGAGAGCCGTTGGTCTGAGTATGAATTGAAGATGAAGTCCATGGAAGAAGTGTGGCAAAAACAAATGAGATCCCTACAGTCCAGCCTCTCTATTGCAAAGAAAAGCCTCGCGATTGATGATTCAGAAAGGAACTCAGATGCATCCGTCAATGCAAGTGATGAAAGAGATTTTAGCTGGGATACAGGAAATAATCATAGACGCCAAGAAAGCAATGGAACAAGATCAATGAGCGCAGGCTTGAGTGTGATAAGTCGGTTGGCTGAAGAATTTGAGCAGAGGAGTCAAGTATTTGGTGATGATGCGAAGTTCTTGGTGGAGGTAAAATCTGGTCAAGTTGACGCAAGTTTGAACCCAGACCAGGAGCTCAGAAGGTTGAAGCAAATGTTCGAAGCTTGGAAAAAGGATTATTGTGCGAGACTACGTGAAACCAAGGTCATTTTACATAAGCTTGGAACTGAAGAAGGTGCACGTGACAAAGTGAAGAAGAAATGGTGGGGAAGAAGGAACAGTACAAGGATAAATTGA 1869 0.4232 MVVRKMTMEDTIRMTATVDNGDKDGSGGLWYGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFRGERDNAFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIQLLSSCRCHLPQIFASFMLTQSEKPVVGPLHKLGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNTQSPGLYEQGLVLQQLKCCGVLEVVRISRLGFPTRMSHQKFARRYGFLLIENAASQDPLCVSVAILHQFNILPDMYQVGYTKLFFRTGQIGVFEDTRNRTLNGILRVQSCFRGHQARGYLKELRRGITTLQSFIRGENIRNEYAASLQRHQAAVLIQKRMKAIFVRSRMKNTNEAAIVIQSIIRGWLVRRCSGDLGSLKSEGMKTNESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDFSWDTGNNHRRQESNGTRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVDASLNPDQELRRLKQMFEAWKKDYCARLRETKVILHKLGTEEGARDKVKKKWWGRRNSTRIN 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1685 622 Gene3D Kinesin motor domain 188 230 IPR036961 -
Lele51g1685 622 ProSiteProfiles IQ motif profile. 371 400 IPR000048 GO:0005515
Lele51g1685 622 Gene3D - 231 295 - -
Lele51g1685 622 ProSiteProfiles Myosin motor domain profile. 1 297 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele51g1685 622 PANTHER MYOSIN 32 617 - -
Lele51g1685 622 SMART iq_5 370 392 IPR000048 GO:0005515
Lele51g1685 622 SMART iq_5 347 369 IPR000048 GO:0005515
Lele51g1685 622 SMART iq_5 321 343 IPR000048 GO:0005515
Lele51g1685 622 SMART iq_5 298 320 IPR000048 GO:0005515
Lele51g1685 622 Gene3D - 32 187 - -
Lele51g1685 622 Pfam IQ calmodulin-binding motif 373 389 IPR000048 GO:0005515
Lele51g1685 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 343 IPR027417 -
Lele51g1685 622 Gene3D - 302 348 - -
Lele51g1685 622 Gene3D - 349 393 - -
Lele51g1685 622 ProSiteProfiles IQ motif profile. 322 351 IPR000048 GO:0005515
Lele51g1685 622 Pfam Myosin head (motor domain) 32 285 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele51g1685 622 MobiDBLite consensus disorder prediction 490 524 - -
Lele51g1685 622 Coils Coil 417 465 - -
Lele51g1685 622 ProSiteProfiles IQ motif profile. 301 328 IPR000048 GO:0005515
Lele51g1685 622 SMART MYSc_2a 1 298 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1685 Lele-ChrLele51 17882344 17888952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1685 32 620 Myosins gene family AT1G50360 76.481 0.0 930