Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1674 ATGAAAACATTCTTGGTGTATGTGGTAGTTTACGTGTTTGATGCTGTTTATATTAACTTGCAACAGAGGAATTATAGAGCTATGACAGTGCTTTCTCAATTTTGGGTTAGCTTTTATTTTGGGCCAACTGGGTTTTTGACAAAACTCCTCACTGAAGATTTACCTCGGTTATTTGTACGTCCAAAGAAAATCGTTTTGGATTTCCAGAAGGGAAAAGCTGTTGGTCCTTTTGCTGGTGATTTAAAATCGGAAGAATTGCAAGATGGAAACAAGGATTTTGTTGGTGAACTATCCGTCACTCTTATTGATGCTAGAAAGCTTTCTTACTTTTTCTATGGAAAGACAGATCCGTATGTTATCCTTACCCTTGGAGATCAAACTATTCGCAGCAAAAAGAATAGTCAAACTACTGTGTTTGGTCCCCCTGGTATGCCAATTTGGAACCAGGATTTTCATATGCTGGTCACTAACCCTAAAAAGCAGAACTTACACATCCAAGTAAAGGATTCGTTGGGATTTATGGATTTGACTACAGGAACTGGGGAGATTGATCTGGGATCTCTCCAAGACACTGTACCAACAGACCGGGTTGTGGTTTTGCAAGGTGGTTGGGGGATTTTGGGAAAGGGCTCTTCTGGGGAGATATTGCTACGACTAACTTATAAAGCATATGTGGAGGATGAGGAAGACGACAAGACTGACTCCATCGACACAGATGCTTCAGATGATGAGTTGTCTGATTCAGAGGAATCAAGTGGTACTAATGAGAGGGGTGAAAGAGATGCTATGAGTGAAAGAGAGTCATTTATGGATGTTTTGGTAGCATTAATTGTTAGTGAAGAATTCCAAGGTATAGTGGCATCTGAAACAGGGTATGCCAAAACTTCAGATGACAGCTTAAGTACAGGGTTTAATGTTCCAAGTTCCAATCTTAATGTGGAACCAAACCCGTCAAATTCTGATAGTTCTGAAGGGTCAACCTTATTCTGGTTTGCTGTGATTACTAGCATATCAATCCTAATTGCTCTCAATATTGGAGTAGCATTTGATGTGTTTTTTATCACATTCTTCGCCTTGGAATACAGTGATGAAAAATCAAAAGTTAAGCATCTTGTATGGAAGAAACGTGATCCTTTCAGTTTTGGATAA 1149 0.3934 MKTFLVYVVVYVFDAVYINLQQRNYRAMTVLSQFWVSFYFGPTGFLTKLLTEDLPRLFVRPKKIVLDFQKGKAVGPFAGDLKSEELQDGNKDFVGELSVTLIDARKLSYFFYGKTDPYVILTLGDQTIRSKKNSQTTVFGPPGMPIWNQDFHMLVTNPKKQNLHIQVKDSLGFMDLTTGTGEIDLGSLQDTVPTDRVVVLQGGWGILGKGSSGEILLRLTYKAYVEDEEDDKTDSIDTDASDDELSDSEESSGTNERGERDAMSERESFMDVLVALIVSEEFQGIVASETGYAKTSDDSLSTGFNVPSSNLNVEPNPSNSDSSEGSTLFWFAVITSISILIALNIGVAFDVFFITFFALEYSDEKSKVKHLVWKKRDPFSFG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1674 382 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 45 347 - -
Lele51g1674 382 Pfam C2 domain 95 191 IPR000008 -
Lele51g1674 382 ProSiteProfiles C2 domain profile. 82 198 IPR000008 -
Lele51g1674 382 SMART C2_3c 96 197 IPR000008 -
Lele51g1674 382 MobiDBLite consensus disorder prediction 228 263 - -
Lele51g1674 382 MobiDBLite consensus disorder prediction 230 249 - -
Lele51g1674 382 Gene3D C2 domain 79 224 IPR035892 -
Lele51g1674 382 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 95 223 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1674 Lele-ChrLele51 17741749 17746170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1674 87 188 C2H2 Transcription Factor Family AT4G05330 33.981 4.76e-06 46.2