LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele51g1641	ATGAATTGCGGCTTTGCCACTAAATGGATAAGTGGAGACACCTTTAAATTCAAAATGTATGAAAGTGAGGAAAGTGGAGAGGTTTGTCACAAACTACGTTTTCTGAGGAGAAAACAGGCCCATAAAGGCGGAGGCCGCAGTGTTCTCCGTCGCCGTCGTCGGCACATGGATATGGATCCTGAGCTCCAACTTCCTCACTCTTCACTCCCTTCGTCCCAGAAAAAGGGTAGATGGAAAACTTTGGTACTTGCATACAGGACCTTGGGGGTTGTATTTGGCGGACTTGTGACATCGCCTCTATATGTTTACCCTTCAATGCCATTGAAGTCTCCAACAGAAGATGACTATCTGGGTGTCTACAGCATCATGTTCTGGACTCTCTCTCTAATAGGGGTTGTAAAATATGCCAGCATAGCTATCGAAGCTGATGATCATGGTGAAGGTGGAACTTTTGCCTTGTATTCATTACTTTGCAGGCATTTGAATATTGGAATCCTGCCTTCTAAGCGACCACATTTACTCTCAATTACAAGTTCAAGCATGCAAAGGGGCACCGAAACACAGAGTAGGCTTGGGAAATTTTTTGAAAGAAGCCTGGTTGCTCGAAGGGTATTACTTTTTCTTGCCATGTTAGGCACATGCATGCTTATAGGTGATGGCATACTTACTCCTGCAATTTCAGTTTTGTCAGCAATTGATGGAATAAGAGCACCCTTTCCTTCTGTCAGCAAATCACTCGTGGAAGCACTTTCTGCAGTTGTCTTGGTCTTTCTTTTCTTGTTGCAGAAATACGGTACATCGCATGTAAGTTTCCTGTTTTCTCCCATAATGGGTGCATGGACCTTGAGCACCCCACTTGTGGGAATTTACAGCATCATACGCCACTATCCAACTATATTCAAGGCCTTATCGCCACACTACATTTTCCGTTTCTTTTTGAAAAATGGAAAAACCGGATGGCTTTTACTTGGCGGAACAGTCCTTTGCATTACAGGTTCTGAGGCAATGTTTGCTGATCTTGGTCATTTTAACCAGCGGTCCATTCAGATAGCATTTTTATTCACAATCTACCCGTCTTTAGTTCTGACTTACGCTGGACAGACGGCTTACCTCATCAAGAATCCCAATGATCATGATGATGGATTCTACAAGTTTATACCATCTCCAATCTACTGGCCTATCTTTGTTATTGCAACATCCGCGGCAATTGTTGCCAGCCAATCATTGATATCAGCCACCTTTTCTGTAATCAAGCAATCTGTTGTTCTGGATTATTTCCCCCGGGTAAAGATTCTACACACATCACATAGTAAAGAAGGAGAAGTTTACTCACCTGAAGTGAACTACATCCTCATGGTCCTTTGTGTTGCTGTCATACTTATTTTCGGGGATGGAAAAGATATCGGGAATGCTTTCGGTGTTGTTGTTAGTCTAGTGATGCTCATCACCACTATATTACTTACACTAGTCATGATCATGATATGGAGGACTCCTGCTATTCTAGTTGCTCTATACTTCTGTGTATTTTTTTTCATGGAAGGGGTTTATGTCAGTGCAGTTTTCACTAAGCTCCTTGAAGGTGGATGGATTCCTTTTGCCATTTCTTTTATCCTCGCTATCATCATGTTCGGTTGGTTTTATGGAAGACAGAGGAAGATTGAGTATGAGGTAGCTCACAAGATAACCTTAGACAGACTCGAAGTGCTTTTGGCGGATCGCAGTGTTCAAACAGTGCCTGGCATATGCTTCTTTTATAGCAACATTCAAGATGGTTTGACTCCTATAATAGGACACTACATAAAGAACATGAAATCCTTCCATAAGGTCACAATATTCACAACTCTTAGGTATCTGTTGGTCCCCAAGGTTGCTTCACATGACAGGATTGTCATAAACAAATTGAGCCACAAAGGGTTTTACAGTTGTGTGATTCAGTATGGTTATGCAGATTCTTTGAACCTTGAAGGAGATGAATTTTTTGCTCAAGTGACTAGTAGTTTGATTCAACATATAAAGAGTTGCAATGGCCATGTCCTATCTGATCCAAATGAGATAGAACAAGAGATTTCTAGGTTAGAAGAAGCACAGTCTGCCGGCGTGGTTCATGTTCGTGGAAAAACTCGGTTTTATATCGGCCCCAATTGTGGCTGGTTTGATAGAACTATGCTGGGATTTTATGAGTTCTTGCATAACAATTGCAGGTCTGGATTGCCTGCTCTAAGGGTCCCCTTACAGCAAAGGCTTGAAGTTGGAATGCTATATGAGGCTTGA	2271	0.421	MNCGFATKWISGDTFKFKMYESEESGEVCHKLRFLRRKQAHKGGGRSVLRRRRRHMDMDPELQLPHSSLPSSQKKGRWKTLVLAYRTLGVVFGGLVTSPLYVYPSMPLKSPTEDDYLGVYSIMFWTLSLIGVVKYASIAIEADDHGEGGTFALYSLLCRHLNIGILPSKRPHLLSITSSSMQRGTETQSRLGKFFERSLVARRVLLFLAMLGTCMLIGDGILTPAISVLSAIDGIRAPFPSVSKSLVEALSAVVLVFLFLLQKYGTSHVSFLFSPIMGAWTLSTPLVGIYSIIRHYPTIFKALSPHYIFRFFLKNGKTGWLLLGGTVLCITGSEAMFADLGHFNQRSIQIAFLFTIYPSLVLTYAGQTAYLIKNPNDHDDGFYKFIPSPIYWPIFVIATSAAIVASQSLISATFSVIKQSVVLDYFPRVKILHTSHSKEGEVYSPEVNYILMVLCVAVILIFGDGKDIGNAFGVVVSLVMLITTILLTLVMIMIWRTPAILVALYFCVFFFMEGVYVSAVFTKLLEGGWIPFAISFILAIIMFGWFYGRQRKIEYEVAHKITLDRLEVLLADRSVQTVPGICFFYSNIQDGLTPIIGHYIKNMKSFHKVTIFTTLRYLLVPKVASHDRIVINKLSHKGFYSCVIQYGYADSLNLEGDEFFAQVTSSLIQHIKSCNGHVLSDPNEIEQEISRLEEAQSAGVVHVRGKTRFYIGPNCGWFDRTMLGFYEFLHNNCRSGLPALRVPLQQRLEVGMLYEA	756

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele51g1641	756	Pfam	K+ potassium transporter	85	650	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele51g1641	756	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	75	755	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele51g1641	756	TIGRFAM	kup: potassium uptake protein	83	755	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele51g1641	Lele-ChrLele51	17419212	17426988	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele51g1641	78	755	Inorganic Solute Cotransporters	AT4G13420	37.959	2.55e-175	521