Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1640 ATGGCGCGCGGAACAATGGCGTACGAAATTTCTATTTCTCATTCTTCTTCGTCTTCGGACACGGAGTCCGACCCATCGGATGCAGTGATATTCGCTGGAATCTGTCTGGCTTTGGGAGTTGCTTGTAGGCATGTTTTTCGCGGGACCAAAGTTCCTTATACAGTGGCTCTGCTCATCATTGGCATTGGCCTTGGATCATTAGAATATGGTACTCATCATCAACTGGGAAAGATTGGCAATGGAATTCGTCTTTGGGCAAATATTGATCCAGGGCTTCTATTAGCTGTTTTCCTTCCTCCACTCCTCTTTGAGGGCTCATTCTCAATGGAATTTCACCAAATTAAGTGGTGTATTGCACAAATGATATTACTAGCTGGTCCAGGTGTTTTGCTCTCAACCTTCTGTCTTGGATCTGTTTTGAAGCTTACTTTTCCATATAACTGGAGTTGGAAAATATCACTACTGCTTGGCGGACTTCTGAGTGCAACTGATCCTGTAGCAGTTGTGGCTTTGCTGAAAGAGCTTGGTGCCTGCAAGAAACTGACTACAATAATTGAAGGGGAATCCATGATGAATGATGGAGTGGCAATGGTTGTTTATACACTAATTTTTCGGATGGTCCTTGGAGAGAGCTTCAACTGGGTGGACATAATCAAATTTCTATCAAAAGCTTCTCTTGGAGCTGTAGGAATTGGCCTTGCTTTTGGGATGGCATCAGTTACGTGGTTTGGATATATTTTTAGTGATACAGTGATTGAAATCACTCTAACACTTGCTGTTAGCTATGTTGCTTATTTCACTGCTCAACAGGGTGCTGATGTTTCTGGCATTTTGACAGTGACGACCCTGGGAATGTTTTACTCTGCAGTTGCGAGGATAGCTTTTAAGAGTGATGGACCAGGAAGCTTGCATCACTTTTGGGAAATGGTTGCTTATATTTCTAATACATTAATTTTCATATTGAGTGGAGTTATTATTGCTGAAGGCGTCCTTAATGGTTCCAATGTTACTGCTGATGGAAAATCATGGGCCAACCTCTTTTTTCTCTATGCCTATGTTCAAGCTTCTAGATGCATAGCAGTTGGAGCACTTTATCCCTTACTAAGTTATTTTGGACATGGTTTGGATTGGAAAGAGGCTGTATTTCTTATTTGGGCAGGATTGCGAGGGCCAGTTTCCTTGTCACTAGCATTGTCAGTTAAGCGTTCAACTGCCAAATCAATTGAATTGAATTCAGATACGGGAACACTGTTTGTTTTCTTCACTGGTGGAATCGTGGTTTTGACGGTCATTGTAAATGCTTCGACTACACAACTCATCTTACACCTCCTAGATATGGATAAGTCCACTTTAGCTAAGAAATGGATCCTTGAGTACTCAAAGTATGAATTGTTGAAGAAATCATTAGAGGCTTTTGTTGAGCTTGGAGATGATGAGGAATTAGGGCCTGCTGATTGGCCTACAGTGAAGAGATATTTAACATGCTTAAATAGCATTGAAGGTCAATGTACTCACGATCATAGTGCGTCTAAAAGTGACAGTACTTTGGATCCTATGAACTTGAAAAATGGGAGAACACGCCTTTTGAATGGTGTTCAAGCTGCTTATTGGGAGATGCTTGATGAGAGAAGAATTTCACAAACAACAGCTGACATCCTACTGAGATCAGTGGAGGAAGCTAGAGATTTGGCTTCACTTGAGCCTTTGTGTGACTGGAAAGGTTTAAGAGATAGAGTTCGCTTCCCAAGTTGTTACAAATTCTTTCAGACTGGAGTTTTACCACAGAAATTAGTTACATATTTTGCTGTGGAAAGATTGGAATCCGCATGTTGTATTTGTGCTTCTTTCCTCCATGCCCATAAAATTGCTCGACGACAGTTGCATGACCTCATAGGGGACAGTGATGTTTCATCTATCATCATCAATGAAAGCGTTGTAGAAGGAGAAGAAGCAAGAAAGTTCCTTGATGATGTTCATATGACATTCCCTCAGGTTCTGCGTGTTGTGAAAACAAGGAAAGCTGCATATTTAGTGTTAAACCATTTAATTGAATATGTTCAAAACCTTGAGAAGTCTGGGTTACTGGGAGAGAGCATGATGCTGCATCTTCATGAGGCTGTCCAGGCTGATTTAAAGAAATTAGTTAGGACTCCTTTATCGTTGAAGTTTCCTGAAAAAAATAGTATACATCCTATGTTGGGTTCCCTGCCATCTTCTATCCAAGAACCACTCTCAAGCGATAGCAGGGAAATGATGACATTGCGTGGTCTGACACTTTGCAAAGAAGGATCCAAACCAGACGGCATTTGGTTAATTTCTAGTGGGGTTGTGAAGTGGGAAAGCAATATAATTGGAAACAAGCACTCCTTTTCTCCAACTTTTACTCATGGGAGTACATTGGGTCTATACGAAGTACTTACTGGAAGGCCATATATCTGTGATGTTATAACAGATTCAGTAGTTCTCTGTTTTTTCCTTGAAGGTGACAAGATGTTATCATGTCTCAAATCAGATCCTTCTATTGAAAACTTCCTGTGGCAGGAGAGTGCTATTTTCCTTTGCAAGATCTTGCTTCCTCAGATGTTTGAAAAAATGGCAATGCAAAATGTGAGAGCCCTTCTTGTGGAAAGATCTGTGATGAACGTATACATTAGGGGAGAATCAATAGAAATACCTCATCGTTCAGTTGGCATTTTACTTGAAGGATATGTTAAAATGGAAGGTCTTCAAGAACTGATAACATCACCAGCTGCTCTTTTGCCTTCACGTGGGAATCTAAGTTTCCAAAATCTGGAAGCTTCTGGTATAGAAAATGCAAGTTTTTCTCATCAAGCTTCATCTTATCTAGTTGAAGAAAGAGCGAGGGTAATCGTGTTTGACATGGCGGCATCTGAGGCTGATGCTGCTCTTTCTAGAAGGTCAAGTTCACCGTTAACGCAAGCAGTTGATCATCCCCATGGATGTTTAAGCAAAGAACATAGTTTTGCGAGTTTGCTTGAAAATTTCGTCAAGCCAAAGCAACATGAGCAATATTGCGAAGTTGTTGGACAACAAACCAGTACTTTGGCTGCAAGGGCAATGCAGTTGAGCATTTATGGCTGCACTGTGGACATCTGTCAACGAAGAAGTTTGTCAAGCTATGGCACAGGAACCCCTCATATGAAAGACCTTGAAGTGAGCCAGGGCGCAGGGAATGCTGCAAATGCCACTGTACAAAGCAGAGAACAACGAGGAAGTAATACGGATGGTACAATTGCTGAATCTGCTGGGGAAGATATCATAGTAAGGATTGATTAA 3297 0.4122 MARGTMAYEISISHSSSSSDTESDPSDAVIFAGICLALGVACRHVFRGTKVPYTVALLIIGIGLGSLEYGTHHQLGKIGNGIRLWANIDPGLLLAVFLPPLLFEGSFSMEFHQIKWCIAQMILLAGPGVLLSTFCLGSVLKLTFPYNWSWKISLLLGGLLSATDPVAVVALLKELGACKKLTTIIEGESMMNDGVAMVVYTLIFRMVLGESFNWVDIIKFLSKASLGAVGIGLAFGMASVTWFGYIFSDTVIEITLTLAVSYVAYFTAQQGADVSGILTVTTLGMFYSAVARIAFKSDGPGSLHHFWEMVAYISNTLIFILSGVIIAEGVLNGSNVTADGKSWANLFFLYAYVQASRCIAVGALYPLLSYFGHGLDWKEAVFLIWAGLRGPVSLSLALSVKRSTAKSIELNSDTGTLFVFFTGGIVVLTVIVNASTTQLILHLLDMDKSTLAKKWILEYSKYELLKKSLEAFVELGDDEELGPADWPTVKRYLTCLNSIEGQCTHDHSASKSDSTLDPMNLKNGRTRLLNGVQAAYWEMLDERRISQTTADILLRSVEEARDLASLEPLCDWKGLRDRVRFPSCYKFFQTGVLPQKLVTYFAVERLESACCICASFLHAHKIARRQLHDLIGDSDVSSIIINESVVEGEEARKFLDDVHMTFPQVLRVVKTRKAAYLVLNHLIEYVQNLEKSGLLGESMMLHLHEAVQADLKKLVRTPLSLKFPEKNSIHPMLGSLPSSIQEPLSSDSREMMTLRGLTLCKEGSKPDGIWLISSGVVKWESNIIGNKHSFSPTFTHGSTLGLYEVLTGRPYICDVITDSVVLCFFLEGDKMLSCLKSDPSIENFLWQESAIFLCKILLPQMFEKMAMQNVRALLVERSVMNVYIRGESIEIPHRSVGILLEGYVKMEGLQELITSPAALLPSRGNLSFQNLEASGIENASFSHQASSYLVEERARVIVFDMAASEADAALSRRSSSPLTQAVDHPHGCLSKEHSFASLLENFVKPKQHEQYCEVVGQQTSTLAARAMQLSIYGCTVDICQRRSLSSYGTGTPHMKDLEVSQGAGNAANATVQSREQRGSNTDGTIAESAGEDIIVRID 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1640 1098 Gene3D - 151 201 - -
Lele51g1640 1098 SUPERFAMILY cAMP-binding domain-like 730 846 IPR018490 -
Lele51g1640 1098 PANTHER SODIUM/HYDROGEN EXCHANGER 15 796 IPR018422 GO:0006812|GO:0015299|GO:0016020
Lele51g1640 1098 Pfam Cyclic nucleotide-binding domain 756 837 IPR000595 -
Lele51g1640 1098 Gene3D Jelly Rolls 725 854 IPR014710 -
Lele51g1640 1098 MobiDBLite consensus disorder prediction 1064 1086 - -
Lele51g1640 1098 ProSiteProfiles cAMP/cGMP binding motif profile. 732 827 IPR000595 -
Lele51g1640 1098 Pfam Sodium/hydrogen exchanger family 31 441 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele51g1640 1098 MobiDBLite consensus disorder prediction 1064 1087 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1640 Lele-ChrLele51 17376016 17410131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1640 25 1056 Antiporters AT2G01980 60.690 0.0 1240
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1640 51 17376016 17410131 Lele51g1640 51 17376016 17410131 ECH
Lele49g1637 49 18416711 18433932 Lele51g1640 51 17376016 17410131 hybridization
Lele50g1740 50 22136036 22149986 Lele51g1640 51 17376016 17410131 hybridization