Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1635 ATGATCCAATGGCGTAAGGGCGAGTTGATTGGATGCGGTGCCTTTGGCCGAGTTTACATGGGCATGAATCTTGATTCTGGAGAGCTTCTAGCTGTAAAGCAGGTTCTGATCGCGGATAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCACATAAAGGAACTTGAGGAAGAAAAAGTTAACAAGAACAAACAAACTGGGTGGGAGACGCCGATTCATGTGGACGCAGCGAGTGGAGGGTTTATAGCTCCATTTTTGTACCCGGAGCTAGAGTGGGATTTCAGGTTGCCATTGGTGAAGAGTATCAATGTGAGTGGCCACAAGTACGGTCTGGTGTATGCAGGCATTGGTTGGGTTCTTTGGAGGACCAAACAAGACTTGCCTCAAGATCTTGTCTTCCACATCAATTACCTCGGAGCTGATCAGCCTACTTTCACCCTCAATTTTTCCAAAGGTTCTAGCCAAATTATCGCCCAGTATTATCAGCTAATTCGCTTGGGCAAAGAGGGCTACCGTAATGTGATGGAGAACTGTAGAGAAAATGCAATGATTCTAAAGGAAGGAATAGTGAACACTGGATGCTTCAACATACTTTCCAAGGACGATGGCGTTCCTGTGGTGGCATTCTCGCTCAAGGACAGAAGCCGGCACGACGAGTTCAAGATCTCCGCCATGCTCCGCCGCAATGGGTGGATCGTGCCGGCATACCCGATGCCACCAGGTGCCGAGCACATCAAGGTGCTGCGTGTTGTGATAAGGGCCGAATTCTCTCGCACCCTAGCTGAACACCTCGTGCTGGACATCACAAACGTGTTGAATGAACTTGAAATGCTTCCTGAATACAAGTCCAATGTCGAACAAGGTATTGTTACTAGCAACGTTGTTAATGTGAAGAATGATCAGAACAGTGATAATATTGAAGGAGGGATGAAGAGGACTGCGTTGGATGTCCAGAGAGAAATCATCGATCAAGAAGCTAACAAGCGCCAAAAAATCTTGGCAGTCTAG 1005 0.4756 MIQWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIADSSASKEKAQAHIKELEEEKVNKNKQTGWETPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVLWRTKQDLPQDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGKEGYRNVMENCRENAMILKEGIVNTGCFNILSKDDGVPVVAFSLKDRSRHDEFKISAMLRRNGWIVPAYPMPPGAEHIKVLRVVIRAEFSRTLAEHLVLDITNVLNELEMLPEYKSNVEQGIVTSNVVNVKNDQNSDNIEGGMKRTALDVQREIIDQEANKRQKILAV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1635 334 Gene3D - 191 278 - -
Lele51g1635 334 Pfam Pyridoxal-dependent decarboxylase conserved domain 63 211 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele51g1635 334 Coils Coil 37 64 - -
Lele51g1635 334 PANTHER GLUTAMATE DECARBOXYLASE 50 326 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lele51g1635 334 SUPERFAMILY Protein kinase-like (PK-like) 4 48 IPR011009 -
Lele51g1635 334 Gene3D - 45 189 IPR015421 GO:0003824
Lele51g1635 334 FunFam Glutamate decarboxylase 191 278 - -
Lele51g1635 334 SUPERFAMILY PLP-dependent transferases 50 274 IPR015424 -
Lele51g1635 334 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1635 Lele-ChrLele51 17328847 17332317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1635 51 321 Calmodulin-binding Proteins AT5G17330 71.218 4.20e-138 399