Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1597 ATGGAGCTTGCATCTGTAAAAACTGAATTCTGCCCAAGAAACCATAGGATGTTTATGATGGAAGGAGGGAATATCGACGTGAAGTGCACAAAAAGGCGGCGAAGAGACTCATCGGTTGCGCTTTTACAGGGAAGTGAGAAACAAGAGCAACCACCACAGGGTGGTCAATCAACTACTGTCAAGAGAAGTTCAAGGTTTCGTGGGGTTAGCAGACATAGATGGACAGGGAGATATGAAGCTCATTTATGGGACAAAGGTACTTGGAATCCAACTCAAAGGAAGAAAGGGAAGCAAGGAGCTTATGCTGATGAAAAAGCTGCTGCTAGAGCATATGATTTGGCTGCACTCAAGTACTGGGGAACTTCTACCTTCACAAACTTCCCTGTATCTAATTATAAGAACGAGATTGAGATAATGAAAACCATGACAAAAGAAGAATATCTTGCTTCATTAAGAAGAAGAAGCACTGGATTTTCCAGAGGGGTATCAAAGTACAGAGGAGTTGCAAGGCACCATCACAATGGAAGATGGGAAGCAAGAATAGGGAGAGTTTTTGGTAACAAGTACCTCTACCTTGGCACTTACAGTACCCAAGAAGAGGCAGCTCGGGCATATGATATAGCAGCTATAGAATACAGAGGCTTGAATGCAGTGACAAACTTTGACTTGAGCACATATATTAGATGGCTAAGACCAGATGCCCTTAATACTACTTCTCAAGAACCAAAGCAAAACCCAGAATTTCACCATCTCATTACCAACCCTAACATCACCCAAACCTGCAGAGAAATCACTGAGGTACCTAATTTCAATCTCAATACAAAAGAGCAAGACATACCTCAGTATTCAACCTCTTTATGTCATAGTAGTAGTGCCAAGTCATCATCTTCTCCAACAGCATTAGGGCTTTTGCTGAAATCCTCAGTGTACAGAGAGCTAATGCAGAAAAATGTGAATCATGGAAAAGGTGAAGAAGAAGAAGAAGAAGAAAACCCACAAGAAGGAAGTAATGGCTTTCCTTACTTTTTCTCTCCCAACGGTAATAGAATACCAAATTCACAGTTACCAGAAGAGAAAGCATTGCCAGCACAGTATCATAGAACTGAGCAATCTGTATGGAATGGGTGCTTTCAAAGAATCTGA 1143 0.4147 MELASVKTEFCPRNHRMFMMEGGNIDVKCTKRRRRDSSVALLQGSEKQEQPPQGGQSTTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQRKKGKQGAYADEKAAARAYDLAALKYWGTSTFTNFPVSNYKNEIEIMKTMTKEEYLASLRRRSTGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGLNAVTNFDLSTYIRWLRPDALNTTSQEPKQNPEFHHLITNPNITQTCREITEVPNFNLNTKEQDIPQYSTSLCHSSSAKSSSSPTALGLLLKSSVYRELMQKNVNHGKGEEEEEEENPQEGSNGFPYFFSPNGNRIPNSQLPEEKALPAQYHRTEQSVWNGCFQRI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1597 380 MobiDBLite consensus disorder prediction 337 353 - -
Lele51g1597 380 SMART rav1_2 164 228 IPR001471 GO:0003700|GO:0006355
Lele51g1597 380 SMART rav1_2 65 134 IPR001471 GO:0003700|GO:0006355
Lele51g1597 380 SUPERFAMILY DNA-binding domain 163 224 IPR016177 GO:0003677
Lele51g1597 380 MobiDBLite consensus disorder prediction 319 360 - -
Lele51g1597 380 ProSiteProfiles AP2/ERF domain profile. 65 128 IPR001471 GO:0003700|GO:0006355
Lele51g1597 380 ProSiteProfiles AP2/ERF domain profile. 164 222 IPR001471 GO:0003700|GO:0006355
Lele51g1597 380 MobiDBLite consensus disorder prediction 41 64 - -
Lele51g1597 380 PRINTS Ethylene responsive element binding protein signature 204 224 IPR001471 GO:0003700|GO:0006355
Lele51g1597 380 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Lele51g1597 380 Gene3D AP2/ERF domain 64 130 IPR036955 GO:0003700|GO:0006355
Lele51g1597 380 Gene3D AP2/ERF domain 163 224 IPR036955 GO:0003700|GO:0006355
Lele51g1597 380 SUPERFAMILY DNA-binding domain 64 130 IPR016177 GO:0003677
Lele51g1597 380 FunFam AP2-like ethylene-responsive transcription factor 163 224 - -
Lele51g1597 380 Pfam AP2 domain 163 214 IPR001471 GO:0003700|GO:0006355
Lele51g1597 380 Pfam AP2 domain 64 120 IPR001471 GO:0003700|GO:0006355
Lele51g1597 380 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 47 290 - -
Lele51g1597 380 MobiDBLite consensus disorder prediction 36 68 - -
Lele51g1597 380 CDD AP2 163 224 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1597 Lele-ChrLele51 16731420 16735169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1597 61 246 AP2-EREBP Transcription Factor Family AT5G57390 63.684 2.81e-79 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele51g1597 AP2 5.5e-07 CL0081