Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1595 ATGCATTTCTTTGACATCCTTAAACAACAAGAACACGAGACTAAAAGAGCTGCTACAGTGATGGGCACAGAAGATCCTAGCCCTAGTACTCATGAAGAAAATGAGCTTGTCTCTCTTTCATTAGGCTTTTCAAGTAAAGAGCAGAATCATTACAGAAGTAGAAATACAAGTATGAAAGAGGGCAATGAGAAGAATTTGGGAGAATCGTCAGGACTTGCACTAGGGCTTGATGTCAGATTTGAAGGAACAAATAACATTATAGCCATTGAAGGTAGCTTTGATGATGATGAGGAGGAGAGGAAGGAAGAAGATGAAGTGACTGAGATGCAGCCACCCAGTAAGGCTCTCAAGACTATGATGAGAAGCAAAGGAGATCATACTCATCAGCTCAAGAAAACTAGGGTTTCTATTCGAGCCAGATGCGATACTCAAACGATGAATGATGGATGTCAATGGAGAAAATATGGACAGAAAATAGCAAAGGGAAATCCATGCCCAAGGGCTTACTACAGATGCACTGTGTCACCATCTTGTCCTGTGAGAAAGCAGGTCTGA 555 0.4162 MHFFDILKQQEHETKRAATVMGTEDPSPSTHEENELVSLSLGFSSKEQNHYRSRNTSMKEGNEKNLGESSGLALGLDVRFEGTNNIIAIEGSFDDDEEERKEEDEVTEMQPPSKALKTMMRSKGDHTHQLKKTRVSIRARCDTQTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVSPSCPVRKQV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1595 184 MobiDBLite consensus disorder prediction 23 51 - -
Lele51g1595 184 MobiDBLite consensus disorder prediction 90 112 - -
Lele51g1595 184 MobiDBLite consensus disorder prediction 1 19 - -
Lele51g1595 184 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 184 IPR044810 GO:0003700
Lele51g1595 184 Pfam WRKY DNA -binding domain 147 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele51g1595 184 Gene3D WRKY domain 133 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele51g1595 184 SUPERFAMILY WRKY DNA-binding domain 139 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele51g1595 184 SMART WRKY_cls 146 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele51g1595 184 ProSiteProfiles WRKY domain profile. 141 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele51g1595 184 MobiDBLite consensus disorder prediction 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1595 Lele-ChrLele51 16645690 16646889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1595 1 184 WRKY Transcription Factor Family AT5G15130 40.909 7.51e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele51g1595 WRKY 1.1e-15 CL0274