Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1590 ATGAAACCTTCAAGTAACCAGGATGTGTTGGCCTCTATTGAGGCATCTTTGCCTTATATCCCTCATTCTTCGCTGATATCCCCACTCACATCTGGAGCTGACGCTAGTAAAGAAGTGCTCTTGGAAAAGGAAGTTGTTAGTAGATCGTCAAATGACAGGAATATTCTTTCAGCTGGGGTTGAAGAGAACAATGCAGAAGCGGTTAATTCTGGTTCACTGGATGATGATGAGAAAACCAGGCTTGCTGAAGCTGCTATAAAAATTCAGGCTGGTTTTAGGGGCTATCAGGCTCTTCAGGCATTTCAAACGCTAAAAGGAGCCATACAACTGCAAGCTCTTATTCGAGGCTACTTGGTTAGGAGGCAAGCTGTTTCTACTTTATACTGTGTCAAGAGAATTGTAAAAGTTCAAGCACTAGTTCGCGGTCACAAGGTTCGACATTCTGATGTTGGGGTTGCTGTTCTCGAAACATTCAAGGATACTAAATGTTCAAATTCTACTGGAGTAGTTACAACTACAGAGGCAGAGAAGTTGCTGACCGGTGTTTTCGTCAACCAGCTTCTGGCCTTGTCATCCTCAACAGTTCCCTTACATCTTAATTTTGATCCTGGAGAACCTAACTTTACTTGGAAGTGGCTTGAGCGTTGGACTAGGTCAAACTTTTGGGCACCTCTTCCCAAATCAGAGAAGAAACATGACTTAAAGTCCAGTGAGAAGAGTGCCAATTGTCAAACGTTTGAACATAACAAGGGGAAGCCTAAAAGGAATGTCAAGAAAGCTTCTGGTTTTAAAGTGGATGATGGCTCAACCTCAGAGTCAAACACACTTAAACAGCCTGCAAAAAAGGAACATCCACAAAAGGAAACAAAAAACCGTATAAAGAAAACTTCAACGCAGAGTGTTTCTAGTACACCCGAGGTTTCCCCTGGGAAAAGGAAACACATCACTGGAAAACTTCCGGTTCATGCAGTTACTGATGTTTCCGCAGATAAAATGAAAAGTTTGGGAGTGTCCAAACCAAAGCAGTCTGATCTTGAAAAGAGCCTTGGGTTGCAAGCAAAAGATAAGAATGGTCACGCACACGAAAACCCTATCGCTGATTTGCAGACTAGTGTAAAGAATGGTAAACAAGTTATTCATGGAGATAGTGAGGACTTGAAAATTGATGTGACCCCTCAGAACTCCCTGAGAAGAGCTTCACTGCCTGCCAGTTTCAATGATCAAGATAATAACAGTTCTCATAACACTCCAAGAGTTCCTGGCTATATGGCCCCCACTGAATCTGCGAAAGCTAAGCTAAGAGCACAAGGCTCCCCTAGGTTTGCTGCTGACTTGGTGGATAAAATTGGTATAACCAGGCGTCATTCACTTTCAACTTCATTATATGGAAGGTTTAGCTCATTTTCCCCACGAACAGGACTGTTAAACACAAGCAGCAGAGGAGTGATCGGGACTGATAGATCTCTGTCATCATTGAGAGATGGAACTGATAAGTTCATCCAACCACATTGGAGAAGGTGA 1521 0.4287 MKPSSNQDVLASIEASLPYIPHSSLISPLTSGADASKEVLLEKEVVSRSSNDRNILSAGVEENNAEAVNSGSLDDDEKTRLAEAAIKIQAGFRGYQALQAFQTLKGAIQLQALIRGYLVRRQAVSTLYCVKRIVKVQALVRGHKVRHSDVGVAVLETFKDTKCSNSTGVVTTTEAEKLLTGVFVNQLLALSSSTVPLHLNFDPGEPNFTWKWLERWTRSNFWAPLPKSEKKHDLKSSEKSANCQTFEHNKGKPKRNVKKASGFKVDDGSTSESNTLKQPAKKEHPQKETKNRIKKTSTQSVSSTPEVSPGKRKHITGKLPVHAVTDVSADKMKSLGVSKPKQSDLEKSLGLQAKDKNGHAHENPIADLQTSVKNGKQVIHGDSEDLKIDVTPQNSLRRASLPASFNDQDNNSSHNTPRVPGYMAPTESAKAKLRAQGSPRFAADLVDKIGITRRHSLSTSLYGRFSSFSPRTGLLNTSSRGVIGTDRSLSSLRDGTDKFIQPHWRR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1590 506 MobiDBLite consensus disorder prediction 402 421 - -
Lele51g1590 506 Gene3D - 78 127 - -
Lele51g1590 506 ProSiteProfiles IQ motif profile. 81 109 IPR000048 GO:0005515
Lele51g1590 506 PANTHER IQ-DOMAIN 5-RELATED 55 460 - -
Lele51g1590 506 MobiDBLite consensus disorder prediction 295 309 - -
Lele51g1590 506 Pfam IQ calmodulin-binding motif 105 122 IPR000048 GO:0005515
Lele51g1590 506 Pfam IQ calmodulin-binding motif 83 101 IPR000048 GO:0005515
Lele51g1590 506 Pfam IQ calmodulin-binding motif 131 146 IPR000048 GO:0005515
Lele51g1590 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 146 IPR027417 -
Lele51g1590 506 MobiDBLite consensus disorder prediction 227 324 - -
Lele51g1590 506 ProSiteProfiles IQ motif profile. 105 132 IPR000048 GO:0005515
Lele51g1590 506 SMART iq_5 128 150 IPR000048 GO:0005515
Lele51g1590 506 SMART iq_5 80 102 IPR000048 GO:0005515
Lele51g1590 506 SMART iq_5 103 124 IPR000048 GO:0005515
Lele51g1590 506 MobiDBLite consensus disorder prediction 277 294 - -
Lele51g1590 506 MobiDBLite consensus disorder prediction 353 372 - -
Lele51g1590 506 Pfam Protein of unknown function (DUF4005) 408 474 IPR025064 -
Lele51g1590 506 MobiDBLite consensus disorder prediction 402 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1590 Lele-ChrLele51 16501479 16505736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1590 56 506 IQD Protein Family AT2G02790 34.357 1.21e-67 226