Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1583 ATGGCTAAGAGACGCATTTTCTTCTTTCGTTTATTTACAATTTTATTCTTCATTTTCCCGCCATGTATGTCCGTAAGGATAGAAACAGAGGCTCTTCTTCAGTTCAAGAAGCATTTGAATGACCCTTTGGATTCTTTGGCTTCCTGGACAGATTCAGAGTCTCCCTGTGAATTCAACGGAGTTACTTGTGATAGATTTTCTGGGCAAGTCGTAGAAGTTTCGCTGGAAAATAAGTCCCTTTCTGGGAAGATTTTCCCATCAATTTTTGCTCTCCAGAACCTTCGAGTCCTGTCACTCGCATCAAATTGTATTTCTGGGAAGCTTCCATTTGAAGTAACCAACTGCAGCAACCTTAGAGTTTTGAACCTAACAGAAAATGAGATGGTTGGGATTTTGCCGGACTTGTCTATGATGACAAATCTCCTAGTTCTTGACCTTTCTGCAAACTACTTTTCCGGCAGATTCCCAAGCTGGGTAGGAAATCTGACTGGTCTAGTTTCGCTAGGGCTCGGGGAAAATGAATATATTGAGAGTGAAATTCCTGAGACTCTTGGAAATCTGAAGAACTTGACTTGGCTCTATCTTGGTGGTTCTCATTTGAGAGGGGAGATTCCAGAATCAATTTATGAAATGAAGGCTTTGGAGACACTGGATATTTCCAGAAACATGATCTCTGGTAAACTCTCCAAGTCAATTCGGAAGTTGAAAAATCTTTGTAAGATTGAGCTTTTCTCAAATAATTTAACTGGGCAAATCCCAGCTGAGTTGGCAAACTTGACCAAGCTTGAGGAGATTGACATTTCGATGAACCATATGTATGGTAAATTGCCAGAGGTGATTGGTACTATGAAGAATTTGGTTGTTTTTCAACTCTATGAAAATAACTTTTCGGGAGAAATTCCTTCTGGGTTTGGAGATATGCAACATCTTGTTGGATTCTCAATTTATCGAAACAGCTTCTTTGGGAAAATTCCTGAAAATTTCGGCCGATTCTCACCACTGGACAGCATTGATATATCAGAGAATCAATTTTCAGGTGATTTTCCAAAGTTCTTGTGTGAAAACAGAAATTTGAAATTTTTGCTTGCTTTGCAAAATAATTTCTCCGGTGCATTTCCGGACACTTATGTTACATGTAAATCATTGGAGAGAGTTAGGGTGAGCAGAAATCGCTTGTCTGGAAAAATTCCAAATGAGTTGTGGGCACTTCCATTTGTAAAGATAATTGATTTGGCTGACAATAATTTTGATGGTGATGTATCTCCAAAAATTGGGCTTTCTTCTAGCTTAAGCCAGTTAGTTCTAACAAAGAACAAGTTTTCGGGTAAGCTTCCTTCACAACTTGGTAAGCTGATGAATTTGGAGAAGTTATGTTTGAGCAACAACAATTTCTATGGTGAAATACCAGCTGAAATTGGAGCTCTGAAGCAATTATCCTCTTTTCATCTAGAAGAGAATTCATTAACTGGATCAATACCTGCAGAACTTGGCAATTGTGCAAGGCTAGTGGACCTGAATCTTGCTCGGAATTTTCTAACCGGCGCTATCCCTCCGTCAGTTTCACTTATGAGCTCAGTGAACTCTCTTAATCTATCTGGCAACAAACTTACAGGATCAATCCCCGAAAGCTTAGTGTCAATGAAATTGAGCTCAATTGATTTTTCCAAAAATCAGTTGTCTGGGAGAATTCCGAGCAATCTTCTAATTATTGGTGGGGATGTAGCATTTGTTGGAAACCCAGGACTTTGTGTTGAACAAAATTCAAAAACTCTTATGAATTCTGAATTCAACATTTGTACAAGCATACATGATCAGAAAAGGGTCTTCTCTGATAAGATAGTAATTCTCTGTGTCATTGCTTCTGTCTTGGTCATCTTCGTGTCGCTTGTGAGTTACGGAAGCTTCAAGCATGAAAGAGCAGACTTGGAGAAAAACTTGCAAGATAAAAAGGAAACAGATTCAAAATGGAAAATTGCTTCTTTCCACCAAGTTGATCTTGATGTGAATGAAATATGTAATTTGAATGAAGATAATTTGATCGGAACCGGCGGTACCGGAAAGGTATATCGAGTTGACTTGAAGAAAAATGGTTCCACAGTGGCCGTAAAACAACTATGGAAAGGAGATGGTGTGAAAATTTTGGCAGCAGAGATGGAGACTTTGGGAAATATCAGGCATAGAAATATACTTAAGCTTTATGCTTGTTTGTTTAAAGGAGGATCAAACTATTTAGTGTTAGAATACATGGCAAATGGTAATCTTTTTCAAGCTCTTCACAGACAGATAAAGGGTGGGAAACCAGAATTGGATTGGTACCAGAGATATAAAATTGCACTGGGAACTGCAAAAGGAATTGCATATTTACATCATGATTGTTCTCCCCCTATCATTCACAGAGACATAAAATCTAGTAACATTTTGCTCGACGAGGATTACGAGGCGAAAATCGCTGATTTCGGGGTCGCAAAATTCGCAGAGAAAACTGATCAACAGCTGGGTTTTAGCTGTCTTGCTGGTACTCATGGTTATATTGCTCCTGAGCTTGCTTATACACGCCAAGTCACTGAAAAGAGTGACGTGTATAGTTTTGGAGTGGTGTTGCTAGAATTACTTACAGGAAGGGAGCCCATTGAAGAGGATTACGGCGAAGGGAAGGATATTGTTTATTGGGTTATGACTAACCTCGATGACCGTGAAAGCGCGATCAAGATCCTCGATGATAAGATAGCATCGGAGTCAGTTGAAGACGAAATGATTAAGGTCTTGAAGGTTGCCATCCACTGCTCAACTAAGCTCCCTTCTCTGCGCCCTACTATGAGAGATGTTATCAAGATGCTTATTGATGCTTATTCTAGCCCTTTTCAATCCCCAGACAGCGATTTTGAGAAAGAAGTTAAGGATTTTATCTCGTGA 2913 0.3938 MAKRRIFFFRLFTILFFIFPPCMSVRIETEALLQFKKHLNDPLDSLASWTDSESPCEFNGVTCDRFSGQVVEVSLENKSLSGKIFPSIFALQNLRVLSLASNCISGKLPFEVTNCSNLRVLNLTENEMVGILPDLSMMTNLLVLDLSANYFSGRFPSWVGNLTGLVSLGLGENEYIESEIPETLGNLKNLTWLYLGGSHLRGEIPESIYEMKALETLDISRNMISGKLSKSIRKLKNLCKIELFSNNLTGQIPAELANLTKLEEIDISMNHMYGKLPEVIGTMKNLVVFQLYENNFSGEIPSGFGDMQHLVGFSIYRNSFFGKIPENFGRFSPLDSIDISENQFSGDFPKFLCENRNLKFLLALQNNFSGAFPDTYVTCKSLERVRVSRNRLSGKIPNELWALPFVKIIDLADNNFDGDVSPKIGLSSSLSQLVLTKNKFSGKLPSQLGKLMNLEKLCLSNNNFYGEIPAEIGALKQLSSFHLEENSLTGSIPAELGNCARLVDLNLARNFLTGAIPPSVSLMSSVNSLNLSGNKLTGSIPESLVSMKLSSIDFSKNQLSGRIPSNLLIIGGDVAFVGNPGLCVEQNSKTLMNSEFNICTSIHDQKRVFSDKIVILCVIASVLVIFVSLVSYGSFKHERADLEKNLQDKKETDSKWKIASFHQVDLDVNEICNLNEDNLIGTGGTGKVYRVDLKKNGSTVAVKQLWKGDGVKILAAEMETLGNIRHRNILKLYACLFKGGSNYLVLEYMANGNLFQALHRQIKGGKPELDWYQRYKIALGTAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEAKIADFGVAKFAEKTDQQLGFSCLAGTHGYIAPELAYTRQVTEKSDVYSFGVVLLELLTGREPIEEDYGEGKDIVYWVMTNLDDRESAIKILDDKIASESVEDEMIKVLKVAIHCSTKLPSLRPTMRDVIKMLIDAYSSPFQSPDSDFEKEVKDFIS 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1583 970 Pfam Leucine rich repeat 140 200 IPR001611 GO:0005515
Lele51g1583 970 Gene3D Ribonuclease Inhibitor 24 175 IPR032675 -
Lele51g1583 970 FunFam Probable inactive receptor kinase RLK902 25 179 - -
Lele51g1583 970 Gene3D Ribonuclease Inhibitor 469 591 IPR032675 -
Lele51g1583 970 Gene3D Ribonuclease Inhibitor 379 468 IPR032675 -
Lele51g1583 970 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 211 947 - -
Lele51g1583 970 SMART serkin_6 674 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1583 970 Gene3D Transferase(Phosphotransferase) domain 1 749 964 - -
Lele51g1583 970 Pfam Protein kinase domain 676 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1583 970 FunFam leucine-rich repeat receptor-like protein kinase TDR 749 957 - -
Lele51g1583 970 SUPERFAMILY L domain-like 53 361 - -
Lele51g1583 970 Coils Coil 632 652 - -
Lele51g1583 970 SUPERFAMILY Protein kinase-like (PK-like) 671 946 IPR011009 -
Lele51g1583 970 SUPERFAMILY RNI-like 252 565 - -
Lele51g1583 970 FunFam Receptor-like protein kinase HSL1 289 592 - -
Lele51g1583 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Lele51g1583 970 Gene3D Phosphorylase Kinase; domain 1 657 748 - -
Lele51g1583 970 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Lele51g1583 970 ProSitePatterns Protein kinases ATP-binding region signature. 680 703 IPR017441 GO:0005524
Lele51g1583 970 Gene3D Ribonuclease Inhibitor 275 378 IPR032675 -
Lele51g1583 970 Gene3D Ribonuclease Inhibitor 176 274 IPR032675 -
Lele51g1583 970 ProSiteProfiles Protein kinase domain profile. 674 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1583 970 FunFam Leucine-rich receptor-like protein kinase family protein 664 748 - -
Lele51g1583 970 FunFam Leucine-rich repeat receptor protein kinase EMS1 204 288 - -
Lele51g1583 970 CDD STKc_IRAK 680 946 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1583 Lele-ChrLele51 16314199 16318212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1583 13 959 Receptor kinase-like Gene Family AT1G72180 57.411 0.0 1075
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele51g1583 Pkinase 6.4e-49 CL0016