Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1571 ATGGCTTTCTTCCCTGCAAATTTCATGCTTCAAACTTCTCACCCTGAAGATCATCATCATCCTCCTTCTCTCAACTCGCTTCTGACTTCATGTGCTCCACAAGATTATCATCACCATGGGGGCCCTTCGTTTCTAGGTAAGAGATGCATGTCATTTTCAGGAATTGAACTGGGGGGTGAAGAAGCTAATAATAATAATGGAGGTGAGGAAGATTTGTCTGATGATGGGTCTCAGGCGGGGGAGAAGAAGAGGAGACTTAACATGGAACAAGTTAAGACACTTGAGAAGAGCTTTGAGCTGGGAAATAAGCTTGAACCAGAGAGAAAAATGCAGCTTGCAAGGGCTCTAGGGTTGCAGCCCAGACAAATCGCAATATGGTTCCAGAACAGAAGAGCAAGGTGGAAGACAAAGCAGCTCGAGAAAGACTATGATGTTCTTAAAAGACAATATGATTCTCTCAAAGCTGATAATGATGCTCTTCAAGCTCACAACCAAAAACTCCAAGCTGAGATATTTGCATTGAAGAACAGAGAGCCAACTGAGTCAATAAACCTAAACAAAGAAACAGAGGGATCTTGCAGCAACAGAAGTGAGAACAGCTCAGAGATTAAGTTTGATATAACAAGAACACCAGCTATTGAAGATAGTCCTGATCTATCAACACAACAAACCAGTGGCATAACCTTATTATTTCCGAAATCTTCTGCTTCTGTTAGGCCTCCTCCTCCTCCTCCCTCTTCAGGAGGAGTGGCTCAGCAGCTCTTTCAAGCTTCTTCAAGACCAGAGCTTCTTCACTGCCAGCAGAATAAGGTAGATAATCAGATGGTCAAAGAAGAGAATAATAATAATAATCATTTGAGCAATATGTTTTGTGGGATCGATGATCAATCAGGGTTCTGGCCATGGTTGGAGCACCAACATTTCAATTGA 930 0.4237 MAFFPANFMLQTSHPEDHHHPPSLNSLLTSCAPQDYHHHGGPSFLGKRCMSFSGIELGGEEANNNNGGEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQYDSLKADNDALQAHNQKLQAEIFALKNREPTESINLNKETEGSCSNRSENSSEIKFDITRTPAIEDSPDLSTQQTSGITLLFPKSSASVRPPPPPPSSGGVAQQLFQASSRPELLHCQQNKVDNQMVKEENNNNNHLSNMFCGIDDQSGFWPWLEHQHFN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1571 309 MobiDBLite consensus disorder prediction 60 86 - -
Lele51g1571 309 ProSiteProfiles 'Homeobox' domain profile. 77 137 IPR001356 GO:0003677
Lele51g1571 309 FunFam Homeobox-leucine zipper protein ATHB-13 74 141 - -
Lele51g1571 309 SMART HOX_1 80 141 IPR001356 GO:0003677
Lele51g1571 309 Coils Coil 129 177 - -
Lele51g1571 309 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 67 222 IPR045224 GO:0003700
Lele51g1571 309 MobiDBLite consensus disorder prediction 182 202 - -
Lele51g1571 309 SUPERFAMILY Homeodomain-like 76 139 IPR009057 -
Lele51g1571 309 MobiDBLite consensus disorder prediction 185 202 - -
Lele51g1571 309 Gene3D - 74 143 - -
Lele51g1571 309 CDD homeodomain 82 138 IPR001356 GO:0003677
Lele51g1571 309 ProSitePatterns 'Homeobox' domain signature. 112 135 IPR017970 GO:0000981|GO:0006355
Lele51g1571 309 Pfam Homeobox associated leucine zipper 137 177 IPR003106 GO:0006355|GO:0043565
Lele51g1571 309 Pfam Homeodomain 82 135 IPR001356 GO:0003677
Lele51g1571 309 PRINTS Lambda-repressor HTH signature 108 117 IPR000047 GO:0003677
Lele51g1571 309 PRINTS Lambda-repressor HTH signature 117 133 IPR000047 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1571 Lele-ChrLele51 15973039 15974879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1571 1 309 Homeobox Transcription Factor Family AT1G69780 61.709 7.51e-118 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele51g1571 Homeodomain 1.6e-15 CL0123