Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1544 ATGGAAGAGAGAAGTGATTCTGAGAAGCTTGATGAAGTCATGCTTCCAGGGTTCAGATTTCACCCAACTGATGAAGAGCTTGTTGGGTTCTATCTCAAGAGAAAGATTCAGCAGAGGCCTCTCTCTATAGAGCTCATAAAGCAGCTTGATATCTATAAATATGACCCATGGGATCTTCCAAAGTTGGCAAGTACAGGAGAAAAAGAGTGGTATTTTTACTGTCCTAGGGACAGAAAATACAGAAACAGTGCAAGGCCAAATAGGGTAACAGGGGCTGGGTTTTGGAAAGCCACAGGCACTGATAGGCCCATCTATTCCTCTGAGGGTTCAAAGTGCATTGGGTTGAAGAAATCTCTTGTCTTCTACAAAGGAAGAGCTGCAAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTCAGATTACCTTCTCTCTCTGACTCTTCTTCCTCTTCACCAAAGAAGTTCATAGAGAGAACCATCCCTGCTAATGATTCGTGGGCAATTTGTAGAATATTCAAGAAAATAAACTCTACAGCCCAAAGAGTTCTCTCTCATTCCTGGGTCTCTCCCTTACCTCATGAAATGAACGCCTCTGAGATGCTAACCAAAGACGGAGACACTTCCAAGTTTTGTTCAGATCATCATAACAACATCATTTCGTCATTGACAAAGAAAACTAGCTTACCCAACCAGTTCTGCACCAACCAAAACGATCCCTTAACCTCCACCACCACCACCACTAGTAGTAGTATTCATTTCCCTTTAGATATTGCCTCTTACAAACCCGTCATTAACCCATTATTGTTTTACAAACCCTTTGACCAATTACCCATCATTTCATCAAATAACTCAGACTTCATGTTTTCATCATCATCACCTCTTGAACCATGCAGTGCTAAAGCCACCACCACCATGGACATTTCCTCCATGTTACTGAGCATGTCATCATCATCTTCTTCTGTGCTTGGAGACTTTTGCAGTAAGGCTGCTTCATCAGAGGTTGTAAATTTTGGAGGGTTTCAAGAACAATACAGCACTAATAATAATACTGGGTATTCACCAGTAATCCAAGATGGGAATGGATTAGTGAAGATGATGATGAATCATCCTAATAATACTAATCTGAATGCGAATGTGGTGATCCCTAGAGTGATGGGGGAGCCAGATCAGGCGAATATGCATGAAGCATGGAAGTCAAATCTGCTTTGGGATAGCTCATCTTGTCCCTGTGATCACGTGCCCTCTACTAATTATTCTACTACTACCAAGTGCTATACTTAG 1281 0.4169 MEERSDSEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLSIELIKQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLSDSSSSSPKKFIERTIPANDSWAICRIFKKINSTAQRVLSHSWVSPLPHEMNASEMLTKDGDTSKFCSDHHNNIISSLTKKTSLPNQFCTNQNDPLTSTTTTTSSSIHFPLDIASYKPVINPLLFYKPFDQLPIISSNNSDFMFSSSSPLEPCSAKATTTMDISSMLLSMSSSSSSVLGDFCSKAASSEVVNFGGFQEQYSTNNNTGYSPVIQDGNGLVKMMMNHPNNTNLNANVVIPRVMGEPDQANMHEAWKSNLLWDSSSCPCDHVPSTNYSTTTKCYT 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1544 426 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
Lele51g1544 426 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 265 - -
Lele51g1544 426 SUPERFAMILY NAC domain 13 174 IPR036093 GO:0003677|GO:0006355
Lele51g1544 426 FunFam NAC domain-containing protein 35 23 177 - -
Lele51g1544 426 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Lele51g1544 426 ProSiteProfiles NAC domain profile. 14 174 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1544 Lele-ChrLele51 14976405 14978068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1544 8 366 NAC Transcription Factor Family AT1G26870 53.619 8.59e-114 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele51g1544 NAM 5.1e-37 No_clan