Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1535 ATGGACTTTACCCCCGTCGCCGCAACCACCCAAACCGTTTCTTCAGATAACCCGACCCGACCTGTCAACGGCTCCGTCAAGAAAAACCCACCTGTAACCGCTCCTCAATCTCCGTCCATGGTGGTTTCTTCCTCCTACAAGGAATGTCTTAAGAACCACGCAGCTAGCATCGGCGGCCACGCCCTTGACGGCTGCGGAGAGTTTATGCCGTCGCTTTCTTCCAACCCCGCCGACCCGCGCTTACTAAAATGCGCCGCCTGCGGTTGCCACCGGAACTTCCACCGCCGTGACCCACAACAAGAGCAGCCCCAGTTCCTCAACTTCTTCTACTCGCCGGCGCTACCTCACCGGAATTTCAGCCCCAGCACGACTCGGAGCACGAGCCCGATGTCAAGCCCTTCGCCGCCTCCGCTGTCGCATTTCCCACCACAGACGTCTTCCTTCCGCTCAGCGGGAGTTGCAGTTCCCCATATGCTCTTAGCACTAGGAACCACTTACTCGGGACCGTCGGAGGAGGAGCACCGGAGCTTCAATTCTCGGGCGCCAGCGACGGAGGCGAAAGAAAACCCGAGTGGAAAAAAGCTGTATAGAACCAAGTTCAGTCCAGAACAGAAGCAGAAGATGTACGAGTTTTCTGAGAAATTGGGTTGGAAAATGCAGAAAGCGGACGATGAGTTGGTTCAGGGATTCTGCAACGAGATTGGCGTTTCAAGAGTGGTTTTCAAGGTGTGGATGCACAATCATAAGAACACATTCAGGAATAAGAGATCAGAATCTGAGAATAACAACAATAATACTGAGAAAGTGACTGAAGAAGAAAATAACAGTAACAATGGCGGTGCTGGTAGGGGTGGGTTTGATAGTGATACCGACAAGAATCCTGTCGCAAAGAGCATTGATATTCATGCTTCTTCTGCTAATGGCTCGTCTTCTTCTTGA 939 0.5229 MDFTPVAATTQTVSSDNPTRPVNGSVKKNPPVTAPQSPSMVVSSSYKECLKNHAASIGGHALDGCGEFMPSLSSNPADPRLLKCAACGCHRNFHRRDPQQEQPQFLNFFYSPALPHRNFSPSTTRSTSPMSSPSPPPLSHFPPQTSSFRSAGVAVPHMLLALGTTYSGPSEEEHRSFNSRAPATEAKENPSGKKLYRTKFSPEQKQKMYEFSEKLGWKMQKADDELVQGFCNEIGVSRVVFKVWMHNHKNTFRNKRSESENNNNNTEKVTEEENNSNNGGAGRGGFDSDTDKNPVAKSIDIHASSANGSSSS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1535 312 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 46 97 IPR006456 -
Lele51g1535 312 SUPERFAMILY Homeodomain-like 185 253 IPR009057 -
Lele51g1535 312 FunFam Zinc-finger homeodomain protein 2 180 254 - -
Lele51g1535 312 MobiDBLite consensus disorder prediction 166 200 - -
Lele51g1535 312 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 193 250 IPR006455 -
Lele51g1535 312 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 46 97 IPR006456 -
Lele51g1535 312 MobiDBLite consensus disorder prediction 117 147 - -
Lele51g1535 312 MobiDBLite consensus disorder prediction 1 39 - -
Lele51g1535 312 MobiDBLite consensus disorder prediction 254 312 - -
Lele51g1535 312 MobiDBLite consensus disorder prediction 268 283 - -
Lele51g1535 312 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 25 251 - -
Lele51g1535 312 Gene3D - 178 255 - -
Lele51g1535 312 Pfam ZF-HD protein dimerisation region 45 98 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1535 Lele-ChrLele51 14322038 14322976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1535 31 256 ZF-HD Transcription Factor Family AT1G69600 43.966 2.78e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele51g1535 ZF-HD_dimer 2.9e-28 No_clan