Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1529 ATGGCTTCCGAACCCGATGTGTTAGAGATTTCAGCAATGTTTGAAAGGATGTTGAGAAACAGAGACCTGTCTCTGTTTCTCCCCTTTATCTCTGGCATATCAAATGCTGCTTCGAGAAGAGAGGGTGAAGACTCAGGTGAGGAAAATGAGAGTGGAGAAAGTCCCCAGCGCGAGAGAATCATCTTGATCAACCCCTTCACACAGGGTATGGTGGTGATCGATGGTGCTTCAAGCCTCGAGGCTCTGATTCGTGATTTGGGTAGGGGCAAGGGTGGGCGGCCTCCAGCTTCCAAAGAATCCATAGATGCTTTGCCAAGTGTTAAAGTAGAGGAAGGTGATGAGGGAGAGTGTGTGATTTGCTTGGAGGAGTGGAAAGCTGGTGGGGAAGTGAAAGAGATGCCTTGTAAGCATAAATTTCATCCCAATTGTGTACAGAAGTGGTTGGGGATTCATGGTTCTTGCCCAGTTTGCAGGTATGAAATGCCTACTGATGAAGAAATTGGGAAGAAGAAAGATGAAGAAGACGGGGAAGAGAGGAGGAGAAGGATAGGGAGAGAAGTTTGGGTTAGTTTCTCTTTCAATGGTGAAGGAAGAAGAGGTGAGAACTCTAATCAAACTCCTTCAGAAGATTCCAATGATTCTTCATCAAGTCCAAGAGGGGATTCCAATGATTCTTCATTAAATCCAAGAGGTGATGCTGAGGAGGTAGATAGTTAG 717 0.4575 MASEPDVLEISAMFERMLRNRDLSLFLPFISGISNAASRREGEDSGEENESGESPQRERIILINPFTQGMVVIDGASSLEALIRDLGRGKGGRPPASKESIDALPSVKVEEGDEGECVICLEEWKAGGEVKEMPCKHKFHPNCVQKWLGIHGSCPVCRYEMPTDEEIGKKKDEEDGEERRRRIGREVWVSFSFNGEGRRGENSNQTPSEDSNDSSSSPRGDSNDSSLNPRGDAEEVDS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1529 238 MobiDBLite consensus disorder prediction 40 55 - -
Lele51g1529 238 ProSiteProfiles Zinc finger RING-type profile. 117 158 IPR001841 -
Lele51g1529 238 SUPERFAMILY RING/U-box 107 164 - -
Lele51g1529 238 FunFam E3 ubiquitin-protein ligase RNF181 85 164 - -
Lele51g1529 238 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 54 162 - -
Lele51g1529 238 CDD RING-H2_PA-TM-RING 116 158 - -
Lele51g1529 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 164 IPR013083 -
Lele51g1529 238 Pfam Ring finger domain 116 158 IPR001841 -
Lele51g1529 238 MobiDBLite consensus disorder prediction 196 227 - -
Lele51g1529 238 MobiDBLite consensus disorder prediction 37 57 - -
Lele51g1529 238 MobiDBLite consensus disorder prediction 193 238 - -
Lele51g1529 238 SMART ring_2 117 157 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1529 Lele-ChrLele51 13615448 13616164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1529 1 199 C3H Transcription Factor Family AT1G26800 54.412 2.95e-67 204