Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1521 ATGCGAAAGAGTCCGAAGTCCACCAAGCCTATGTCAACATGTAGAGAGGAGCAATGGAAAATTGCGCTAGAAGAACTTTCACACAAGTTGATTCAAGGTACTAGGAAAAGAGACAAGGCTGTCACGCCTCCTCACATTTTACTTCACACAACTTCCTCATCTTCTCTGGCTTGTTGCTCTGCTTCCTTCCTTCAAGCTTCTGTGTTAAAGAAAATCAAAATGGCTCACATGGGGTTGCTTGTTGCCGTAATGGCTTTTCTCACGGTGGTTTCGTCCACCCATGGCTTCGGCGGAGGGTGGACGAACGCTCACGCCACCTTCTATGGAGGAAGTGACGCGTCAGGGACAATGGGTGGTGCTTGTGGGTATGGGAATCTTTACAGCCAGGGGTATGGAACTAACACTGCTGCTCTGAGCACTGCTCTGTTCAACAATGGCCTGAGCTGTGGTTCTTGCTTTGAGATTAAGTGTGCGAATGATGCCAAATGGTGCCTTCCTGGCTCTATTGTGGTCACAGCCACCAATTTCTGCCCTCCAAACAATGCCTTACCCAACAATGCCGGTGGCTGGTGCAACCCTCCCCTCCAACACTTTGACCTTGCTCAGCCCGTCTTCCTCCGCCTTGCCCAGTACCGCGCAGGCATCGTCCCGGTCGCCTACCGAAGGGTGCCCTGTAGGAGAAGGGGAGGAATCAGATTCACAATCAATGGACACTCCTACTTCAACCTGGTACTGGTCACCAACGTCGGCGGCGCCGGAGATGTTCATGCGGTGGCTATCAAGGGTTCTAGAACCGGGTGGATGGCGATGTCAAGGAACTGGGGACAGAACTGGCAGAGCAACAACAACCTTAACGGACAAAGCTTGTCGTTTAGGGTTACAACAAGTGATGGTCGCACTGTTGTGTCTAACAACGTTGCTCCAGTAGGCTGGTCCTTTGGCCAAACCTTCACTGGGGCTCAGTTTCACTAA 972 0.5175 MRKSPKSTKPMSTCREEQWKIALEELSHKLIQGTRKRDKAVTPPHILLHTTSSSSLACCSASFLQASVLKKIKMAHMGLLVAVMAFLTVVSSTHGFGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCFEIKCANDAKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPLQHFDLAQPVFLRLAQYRAGIVPVAYRRVPCRRRGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAIKGSRTGWMAMSRNWGQNWQSNNNLNGQSLSFRVTTSDGRTVVSNNVAPVGWSFGQTFTGAQFH 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1521 323 Gene3D - 230 323 IPR036749 -
Lele51g1521 323 SUPERFAMILY Barwin-like endoglucanases 99 248 IPR036908 -
Lele51g1521 323 FunFam Expansin 89 226 - -
Lele51g1521 323 PRINTS Expansin/Lol pI family signature 139 157 IPR007118 GO:0005576
Lele51g1521 323 PRINTS Expansin/Lol pI family signature 267 281 IPR007118 GO:0005576
Lele51g1521 323 PRINTS Expansin/Lol pI family signature 99 114 IPR007118 GO:0005576
Lele51g1521 323 PRINTS Expansin/Lol pI family signature 117 135 IPR007118 GO:0005576
Lele51g1521 323 PRINTS Expansin/Lol pI family signature 213 229 IPR007118 GO:0005576
Lele51g1521 323 PRINTS Expansin/Lol pI family signature 305 319 IPR007118 GO:0005576
Lele51g1521 323 Gene3D - 86 226 IPR036908 -
Lele51g1521 323 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 118 230 IPR007112 -
Lele51g1521 323 FunFam Expansin 230 322 - -
Lele51g1521 323 PANTHER EXPANSIN-A15 81 322 IPR002963 GO:0009664
Lele51g1521 323 Pfam Lytic transglycolase 135 220 IPR009009 -
Lele51g1521 323 PRINTS Expansin signature 188 205 IPR002963 GO:0009664
Lele51g1521 323 PRINTS Expansin signature 305 321 IPR002963 GO:0009664
Lele51g1521 323 PRINTS Expansin signature 169 179 IPR002963 GO:0009664
Lele51g1521 323 PRINTS Expansin signature 130 144 IPR002963 GO:0009664
Lele51g1521 323 PRINTS Expansin signature 157 168 IPR002963 GO:0009664
Lele51g1521 323 PRINTS Expansin signature 241 262 IPR002963 GO:0009664
Lele51g1521 323 PRINTS Expansin signature 229 241 IPR002963 GO:0009664
Lele51g1521 323 PRINTS Expansin signature 205 218 IPR002963 GO:0009664
Lele51g1521 323 PRINTS Expansin signature 276 297 IPR002963 GO:0009664
Lele51g1521 323 Pfam Expansin C-terminal domain 231 308 IPR007117 -
Lele51g1521 323 SUPERFAMILY PHL pollen allergen 227 319 IPR036749 -
Lele51g1521 323 SMART dpbb_1 135 220 IPR007112 -
Lele51g1521 323 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 240 319 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1521 Lele-ChrLele51 11648834 11651103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1521 74 322 Expansin Gene Family AT2G03090 82.400 8.66e-157 437