Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1515 ATGGGTAGGTCACCTTGCTGTGAGAAAGTGGGGTTGAAGAAAGGGCCATGGACTCCTGAAGAAGACCAGAAGCTCGTCGCTTACATTGAACAACATGGCCATGGAAGCTGGCGTGCTTTGCCTGCCAAAGCTGGACTTGAGAGATGTGGGAAAAGTTGCAGACTGAGATGGACTAATTATCTCAGACCTGATATTAAACGAGGAAAGTTCAGCTTGCAAGAAGAGAGAACCATTATTCAACTTCATGCTCTTCTTGGAAACAGATGGTCAGCGATAGCGGCTCACTTGCCTAAGAGAACAGACAATGAGATCAAGAACTACTGGAACACTCATCTCAAGAAGAGGCTCGCCAGAATGGGAATCGACCCGGTCACGCACCGGCCTAAAGTTGATGCCGGTGGCGGCCCCGCTAGCTCGAGCCTCAGCCACATGGCTCAGTGGGAGAGCGCCCGGCTTGAAGCTGAAGCCAGGCTGGTCAGAGAGTCCAAGCTCCAGCTTGGCCCAGCTTTTTTCCCATCGGCCCAACCGGCTCGGCTCGTCCTCAACAGAATCTCGGCTCGCCAGTCCGGTCCGCCATGCCTAGACGTCCTCAAAGCATGGCAAAACTCATGGTCGTTGCCGGCTGCAGCACAAGACAAAAATACCAGAATGCCTAACATGTACGCCTTGATGCTTGTCGCAGCTGACGACGACCTCGAGTCGCCAACCTCCACCTTGAGCTTCCCGGAACCCATGTTACCACCTAGCTCCACTAACACTACCACCGTAGGAATATTACCCATTGAAAATCTCACCATCCCTCCAACAACCACCACCACGACGGTTAGTTCCGTCACCGCACCCACTTCAGGAATCGATCCATGGGAGTGTTTGCCGGAGGGGAACCGGGACTCGGAGCCGATCATTGGAGAAAGAACAAATTTACAAGACGACGACATTATGGTGGCGGTGGAGGCATTTATGGGAGAAAGGTACAAGAACGTACAAGTGAATTTACAAGAAATACTGTCGTCAAACAGTATAATAGAAGGTTTAAACAGCGAAGATAATCACGATGATGTGCTTATTTTCGAATCCAATGAGAACATTAACAACTTGGGGTTCGTGGATATTAATGGCGAAGGAAACATGATTTGTTCAACTTCAAACACAAACTTTGAGGAGAAGAATCATTACTGGAACAGCATATGTAGTACACTAACATGGTAA 1209 0.4946 MGRSPCCEKVGLKKGPWTPEEDQKLVAYIEQHGHGSWRALPAKAGLERCGKSCRLRWTNYLRPDIKRGKFSLQEERTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLARMGIDPVTHRPKVDAGGGPASSSLSHMAQWESARLEAEARLVRESKLQLGPAFFPSAQPARLVLNRISARQSGPPCLDVLKAWQNSWSLPAAAQDKNTRMPNMYALMLVAADDDLESPTSTLSFPEPMLPPSSTNTTTVGILPIENLTIPPTTTTTTVSSVTAPTSGIDPWECLPEGNRDSEPIIGERTNLQDDDIMVAVEAFMGERYKNVQVNLQEILSSNSIIEGLNSEDNHDDVLIFESNENINNLGFVDINGEGNMICSTSNTNFEEKNHYWNSICSTLTW 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1515 402 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele51g1515 402 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele51g1515 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele51g1515 402 FunFam MYB transcription factor 68 129 - -
Lele51g1515 402 Gene3D - 69 116 - -
Lele51g1515 402 FunFam MYB-related transcription factor 13 66 - -
Lele51g1515 402 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 228 - -
Lele51g1515 402 SMART sant 66 114 IPR001005 -
Lele51g1515 402 SMART sant 13 63 IPR001005 -
Lele51g1515 402 Gene3D - 13 66 - -
Lele51g1515 402 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele51g1515 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele51g1515 402 CDD SANT 16 61 IPR001005 -
Lele51g1515 402 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele51g1515 402 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele51g1515 402 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1515 Lele-ChrLele51 11520851 11523392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1515 1 248 MYB Transcription Factor Family AT3G01140 62.451 5.08e-102 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele51g1515 Myb_DNA-binding 3.6e-15 CL0123