Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1502 ATGATAGATACACACAACGAGATTATTTGGCTCATTTGTTCAGTTATGATTGAATATGTTTTCTTTCATTGTGTGACTGAACTTTTGGCTATATGCTTGAGAAATCATAAACAAAAGAAAACGGGGGAAATCGGCGGATTGAAGTGGTCTAGATTCAAATTAATGCATGATCATAGAAGGCTCCACAGAAATGATGCTGCCCCATCACTATATACTTCACATGTTTATCCTGATAGACCCACCTTCATAAGTGCATCAGTGGCCCTCCCTAGTCCCACACCAGTAAAATCCTCTTTCTGTTCTTTTCTTCCTGTGAGCATTTTGTCTGGCGTGCAAAATGGCTCTAGTGGTCCAGAGAGTGAAAGAATATGTTATTTTCTTTGTTGTGTAGAAGAGTGGTGGTGGTTTGATAAAAAACAGAGTGCTGCTGCTGACAAAGGCTTCTTACATGACAAGCGGCAAGTTCAGTGTATGTGTGGGATAGCGATTTCTTATGTGTGGATTATATTTGATTATTGTAAGCCAAGGACACCCCCAAGTTACTACTCTGTTTTTCTCAACTTCTCTCTCACTATCATTTTGCTCTCAATCAAAATCAAAATCAAAATCATGGAAGGCACAGACAACAAGCCCAATGCTAACAAGAAGTTCATAACAAAAAGAAGCAGCTTCAGAGGCGGAACCAACCCTCATGAACATCTTCATCATCAGCATCAGCATCAGCTACTACAACAATACTCGACTCAGTTGGGGTTCTGTTACCAGAACGAGTATCAGAGGTACTACCCGGCTCTTCTTCCTCTACCTTCTCTTCTACCTCTGCAACTAGCTTTGACGCCATCGTTCACTCAAGACCAGACCGTCAAAACGAAAACCCATTCACAGAAGTCTCCATGCAAGCTGAATAATTCTCCGTTTGCTGCCTCATCTTATAGCAAAGTCTCAGTAGACAACACAGCTGCTCATGCTCCCAAGGAGTATCATCAGCAAGCCAAGGCATCCCTTCAAGGAGATGACTGGAAGAAACTCATACCTGCAAGAAAACCACAGCCACTAGTTGCCGCAAGGAGGCCAGACTCCGGTGGCAAAGAGGGGTCTGCAGTCTCTCTCCTTGCCAACCACTTTCTAGTGAAGTTTGATTCATCGCAAAAAATATACCATTACAATGTTGAAATTACTCCCAATCCCTCCAAGCAAGTTGCCCGAGTAATCAAAGAGAAGTTTGTTAATAATAATTCTTCTGTGCTTTCTGGTGCTGTTCCAGCATATGATGGGCAGAAGAATCTTTACAGCTCTGTTGAATTCCAAAATGATAAGCTTGAGTTCTACGTAAGCCTGCCAATCCCAGTAAGCAAGAGCTCATCCCCACCTGATAGAGAAATGTGTGACATGAAAGAGAGGCATGAACAACTTAAACTGTTCAGAGTAAACATAAAACTAGTCTCTAAGATCAATGGGAAGCAGTTGGCAAAATACTTGAGCAAAGAGGAAGATGATTGGATTCCACTTCCGCAGGATTATCTCCATGCTTTGGATGTAGTTCTGAGGGAGAGTCCAACTGAGAAGTGTATACCTGCTGGAAGATCCTTCTATTCAACTTCAATGGGAAGAACCAAAGAGATTGGTGGAGGAGCTGCTGGGTTGAGAGGGTTCTTTCAGAGTCTTAGACCAACTCAGCAAGGACTTGCCCTCAATGTTGACTTTTCTGTAACTGCTTTCCATGAAAGCATAGGAGTGATTCCATACTTGCAGAAGCGTCTCGAGTTCCTTCGAGATCTTTCTCAAAGTAAGACAGCAAGTTTAACAGGTGAAGAGAGGAAAGAAGTGGAGAGGGCCTTGAAGAACATCAGGGTCTTCGTTTGTCATAGAGAAACTGTTCAGAGATATCGTGTCTATGGCTTAACTGAGGAGGCTACTGAGAATCTTTCGTTTACCGACAGGGATGGAAAGAATCTGAGGCTCGTTAGCTATTTTAAAGATCACTATAACTATGACATACAGTTTTGTAAATTGCCATGCTTGCAAATTAGTAGGAGCAAACCATGTTATCTTCCTATGGAGCTTTGTGTCATCTGTGAAGGCCAGAAGTTCCTTGGAAAGCTTTCTGATGATCAGACTGCAAAAATACTTAAGATGGGCTGCCAAAGACCAAGAGAACGAAAAGCCATCATTGAAGGAGTCATGAGGGGGCCTGTTGGGCCAACTAGGAATCGTTTTGGCAGTGGAAACCAGGAAAGAGAATTCAACCTCCAAGTGTCAAGAGAAATGACTCGTTTATCTGGGAGAATTCTCCATCCTCCCAAGCTAAAGCTTGGAAATGGAGGCAATGTGAAGAAACTAGTTCCTTCACGGCATGACCGCCAGTGGAACCTTCTAGATGGTCATGTCTTCGAGGGAACTAAGGTTGAACGGTGGACGTTAATAGGCTTTGGTGGTACACCTGAACAGAAATCCAATGTCCCTAGATTTATAAGCCAGCTATCTCAAAGGTGTGAAGAAATGGGCATTTTTCTTAACAAGAGCACAATTGTTAGTCCCCATTTTGAATCAGCCCAGGTGCTTAATAATGTCTCCCTCCTTGAATCTAAGCTCGAGAAAATCCAGAGAAGCGCCTCAAACAATCTGCAGCTTCTTATTTGTGTTATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAAAGAATTGCAGAAACAAGTATTGGGGTTGTGAGCCAATGCTGCTTGTATCCAAATCTCAGTAAATTAAGTTCACAATTTTTGGCAAATTTGGCTCTCAAGATCAATGCCAAAGCTGGTGGATGCACTGTTGCCCTGTACAATTCACTTCCATCTCAGATTCCAAGACTCTTTAAGTATGATGAGCCAACTATTTTCATGGGTGCTGATGTAACTCATCCTCATCCACTTGATGATCATAGTCCTTCGGTTGCCGCCGTCGTTGGTAGCATGAATTGGCCTTCTGCGAACAAATATATTTCGAGAATAAGGTCGCAAACGCACCGACAAGAAATCATCCAGGATCTAGGGGCAATGGTGAAGGAGTTACTAGATGATTTCTATCAGGAGGTAAAGAAACTCCCTGGGAGAATAATTTTCTTTAGAGATGGGGTTAGTGAAACCCAATTCTATAGAGTTCTTCAAGATGAACTTCAATCCATCAAAGGGGCATGTTCTAGATTCCCTGGTTATAAACCATTCATTACTTTTGCAGTAGTACAGAAGAGGCATCACACAAGGTTGTTTCCCTTTGAAACTGATCATTGTTATGAGAATATTCCACCGGGAACCGTGGTTGACTCCGTCATCACTCATCCGAAGGAGTTCGATTTCTATCTTTGTAGCCATTGGGGCATGAAAGGAACAAGCAGGCCAACTCGTTACCATGTTTTGTGGGATGAAATCAAGTTTACTTCTGATGAACTCCAGAAGCTGGTTTACAACTTATGCTTTACTTTTGTTAGTTGCACCAAGCCAATTTCTTTGGTTCCTCCTGCTTATTATGCCCATTTAGCTGCATACAGAGGAAGACTCTACCTTGACAGGTCAGATTCCTCTGCTTTATCTAAGGGTATCTCTTCATTATCTAGAGCTGCGCCTCCAAAGACAGCACCTCTTCCAAAACTTAGTGAGAACATCAAGAAGCTCATGTTCTACTGCTAA 3660 0.4246 MIDTHNEIIWLICSVMIEYVFFHCVTELLAICLRNHKQKKTGEIGGLKWSRFKLMHDHRRLHRNDAAPSLYTSHVYPDRPTFISASVALPSPTPVKSSFCSFLPVSILSGVQNGSSGPESERICYFLCCVEEWWWFDKKQSAAADKGFLHDKRQVQCMCGIAISYVWIIFDYCKPRTPPSYYSVFLNFSLTIILLSIKIKIKIMEGTDNKPNANKKFITKRSSFRGGTNPHEHLHHQHQHQLLQQYSTQLGFCYQNEYQRYYPALLPLPSLLPLQLALTPSFTQDQTVKTKTHSQKSPCKLNNSPFAASSYSKVSVDNTAAHAPKEYHQQAKASLQGDDWKKLIPARKPQPLVAARRPDSGGKEGSAVSLLANHFLVKFDSSQKIYHYNVEITPNPSKQVARVIKEKFVNNNSSVLSGAVPAYDGQKNLYSSVEFQNDKLEFYVSLPIPVSKSSSPPDREMCDMKERHEQLKLFRVNIKLVSKINGKQLAKYLSKEEDDWIPLPQDYLHALDVVLRESPTEKCIPAGRSFYSTSMGRTKEIGGGAAGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQSKTASLTGEERKEVERALKNIRVFVCHRETVQRYRVYGLTEEATENLSFTDRDGKNLRLVSYFKDHYNYDIQFCKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGPVGPTRNRFGSGNQEREFNLQVSREMTRLSGRILHPPKLKLGNGGNVKKLVPSRHDRQWNLLDGHVFEGTKVERWTLIGFGGTPEQKSNVPRFISQLSQRCEEMGIFLNKSTIVSPHFESAQVLNNVSLLESKLEKIQRSASNNLQLLICVMERKHKGYADLKRIAETSIGVVSQCCLYPNLSKLSSQFLANLALKINAKAGGCTVALYNSLPSQIPRLFKYDEPTIFMGADVTHPHPLDDHSPSVAAVVGSMNWPSANKYISRIRSQTHRQEIIQDLGAMVKELLDDFYQEVKKLPGRIIFFRDGVSETQFYRVLQDELQSIKGACSRFPGYKPFITFAVVQKRHHTRLFPFETDHCYENIPPGTVVDSVITHPKEFDFYLCSHWGMKGTSRPTRYHVLWDEIKFTSDELQKLVYNLCFTFVSCTKPISLVPPAYYAHLAAYRGRLYLDRSDSSALSKGISSLSRAAPPKTAPLPKLSENIKKLMFYC 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1502 1219 SMART DUF1785_2 524 576 IPR014811 -
Lele51g1502 1219 CDD PAZ_argonaute_like 587 692 - -
Lele51g1502 1219 Gene3D - 763 939 - -
Lele51g1502 1219 Pfam Argonaute linker 1 domain 526 574 IPR014811 -
Lele51g1502 1219 Gene3D paz domain 570 697 - -
Lele51g1502 1219 SUPERFAMILY Ribonuclease H-like 862 1180 IPR012337 -
Lele51g1502 1219 Pfam N-terminal domain of argonaute 367 515 IPR032474 -
Lele51g1502 1219 ProSiteProfiles Piwi domain profile. 877 1180 IPR003165 GO:0003676
Lele51g1502 1219 SUPERFAMILY PAZ domain 571 729 IPR036085 GO:0005515
Lele51g1502 1219 Pfam Piwi domain 878 1176 IPR003165 GO:0003676
Lele51g1502 1219 FunFam Protein argonaute 7 571 697 - -
Lele51g1502 1219 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 347 1181 - -
Lele51g1502 1219 FunFam Argonaute 10 763 939 - -
Lele51g1502 1219 Pfam PAZ domain 587 709 IPR003100 GO:0005515
Lele51g1502 1219 Gene3D - 951 1219 IPR036397 GO:0003676
Lele51g1502 1219 SMART Piwi_a_2 877 1180 IPR003165 GO:0003676
Lele51g1502 1219 CDD Piwi_ago-like 746 1179 IPR045246 -
Lele51g1502 1219 SMART PAZ_2_a_3 584 724 IPR003100 GO:0005515
Lele51g1502 1219 ProSiteProfiles PAZ domain profile. 584 693 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1502 Lele-ChrLele51 11164143 11171002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1502 362 1219 Eukaryotic Initiation Factors Gene Family AT1G48410 41.157 0.0 634