Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1489 ATGCTTGGCGGGTTCTTTCAAAGTCATATTCAGAGAGGATCAGATGGCAAATCCTCATGGGTGTTTTCACCTTCTGGAGATTTTGCATTTGGGTTTCAACCAATTAAAGATGATCATTCCTTCTTGCTCTCCATCTGTTATGCTAAGATTCCAAACACAACCATTGTTTGGTATGCCAATGGAGACAATCCTGCTCCAAAAGGGTCAACAGTTCAACTTACTGCTGCACAAGGGCTTAGGCTTACTTCTCCTCATGGTCAGATTTTGTGGATTTCAGACAAGGATCCTAATGACACCATATTGCGCTCACAAATTTTGGGAAGAGGAGGAATGCTTTCTTCTAGAAAATCAGAGACAAATATCACCAGGGGAAAGTTCCAACTTCTTCTTCAAGATGATGGTAATCTCGTGATGCATTCCACAAACTTACCATCTGGGTTTCCTAATGAAAATTATTTTGAAAGCGATCCTCTTTTTGATAATGAAACAAGCCCTGGCATTCAACTAGTCTTCAACAAATCCGGGGAGCTATTAGGTAACACTTGTTGTAAGAAGACATGGCCACTCAAAAATGGAAAATTTGACCCAAGGCTAAATGGTTCTAAGGCCTTTTTAAAGTTGAGGATTGGCAATTCCTCTCAAACTAGATTTCCCTTCATTTACAAATTCGAGAAGAAGTTTAAAAATGCCAGTCTAAGAGATACTGATGTTGAAACTGTTATTTTGCGTTGTTTTACTTATCAGGAGCTTGAAGAGGCTACAAATGGGTTCATAGAAGAGTTAGGAAGAGGATCTTTTTGTGTAGTTTATAAAGGAGTCATAAAAGTGGGTCCCACTTCTACTATTCAAGTGGCAGTCAAAAGGTTGAACTTTCTCTTGGAAGAAGAAAATGAGAAGGAGTTCAAGAATGAAGTGAATGTCTTGGGACAAACTCATCACAAGAATTTGGTCCGTTTGCTTGGATTCTGTGATGAAGGAGAAGAAAGAAGAAGCGTGGAAATGGATTCACAAAATGCTGCAGAGAAGGCAATCTTAGCAGATTGGGCTTATGATTGTTTCACAGAAGGTTCTTTAGATGCTTTGGTTGAAGAAGATCAAGAGGCACTGGATGACAAAAAGAATATGGAAAAATTAGTGATGATTTCCATTAGGTGTGTTCAAGAGTACCCAAGTCATAGACCTTCCATGAGAAAGGTTCTTCAGATGCTTGAAAGTGTTGTTGAAGTGCCTGTTCCACCATGCCAGACAGACCTCAGAGTGAACGTCATCAAGATCAATATCACTCACTCACTCAGCATGATTGAAAGTATGTAG 1314 0.395 MLGGFFQSHIQRGSDGKSSWVFSPSGDFAFGFQPIKDDHSFLLSICYAKIPNTTIVWYANGDNPAPKGSTVQLTAAQGLRLTSPHGQILWISDKDPNDTILRSQILGRGGMLSSRKSETNITRGKFQLLLQDDGNLVMHSTNLPSGFPNENYFESDPLFDNETSPGIQLVFNKSGELLGNTCCKKTWPLKNGKFDPRLNGSKAFLKLRIGNSSQTRFPFIYKFEKKFKNASLRDTDVETVILRCFTYQELEEATNGFIEELGRGSFCVVYKGVIKVGPTSTIQVAVKRLNFLLEEENEKEFKNEVNVLGQTHHKNLVRLLGFCDEGEERRSVEMDSQNAAEKAILADWAYDCFTEGSLDALVEEDQEALDDKKNMEKLVMISIRCVQEYPSHRPSMRKVLQMLESVVEVPVPPCQTDLRVNVIKINITHSLSMIESM 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1489 437 Gene3D Phosphorylase Kinase; domain 1 227 330 - -
Lele51g1489 437 SMART tyrkin_6 257 403 IPR020635 GO:0004713|GO:0006468
Lele51g1489 437 ProSiteProfiles Bulb-type lectin domain profile. 7 151 IPR001480 -
Lele51g1489 437 ProSiteProfiles Protein kinase domain profile. 255 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1489 437 SUPERFAMILY alpha-D-mannose-specific plant lectins 50 139 IPR036426 -
Lele51g1489 437 Coils Coil 358 378 - -
Lele51g1489 437 FunFam S-receptor-like serine/threonine-protein kinase 224 333 - -
Lele51g1489 437 SMART blect_4 8 150 IPR001480 -
Lele51g1489 437 Gene3D Transferase(Phosphotransferase) domain 1 331 420 - -
Lele51g1489 437 Gene3D - 11 163 IPR036426 -
Lele51g1489 437 SUPERFAMILY Protein kinase-like (PK-like) 236 328 IPR011009 -
Lele51g1489 437 Pfam Protein tyrosine and serine/threonine kinase 258 328 IPR001245 GO:0004672|GO:0006468
Lele51g1489 437 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 15 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1489 Lele-ChrLele51 10978658 10981389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1489 243 387 Receptor kinase-like Gene Family AT3G59420 32.653 1.58e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele51g1489 PK_Tyr_Ser-Thr 3.2e-12 CL0016