Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1470 ATGTTTGGGTTTATGAAAGCAGCCCCAAAAGAGGAGAACCCTGCAGGCACAGTATCTTCCACTCCTGAGACAACCCTTAAGCCAGAAAGAAGAACAACATCAGAACCTGTCCCAGCACCAAAATCCAAAGGAAACTACTTTGATGACGATGACGACGATGATTGGGGAAGAGGAAGAAAGGCATCTGCCACTTCATCATCTACCTCGGCTGCTGCTAAAAACAGGTACAATAATGATTTCAAGGACTCTGGGAGCCTAGAGAACCAGAGTGTCCAAGAGCTGGAAAACTATGCTGTATATAAGTCTGAAGAGACCACAAAGGATGTTAATAATTGTCTGAGGATAGCTGAGGACATCAGAGGGGATGCTACAAAGACCCTCGACATGCTGCACCAGCAGGGTGAGCAAATTCACAGGACCCACAATATGATTGTTGAGACTGAAAAGGATTTGAGTCGGGGTGAAAAACTGTTGAACAATCTTGGAGGCATGTTCTCTATGCCTTGGAGGCCTAAGAAGACCAAGGAGATTAAAGGCCCTGTAATTACACCAGACAAGCCATCTAAGACAAATGAAAACAAGCATAAGGAAGAGAGGGAAAAGTTAGGCCTAAATGATGATAAAGGAAAGGCAGCTTCTAAAATAACTTCTGAACCAGCAGATGCATATCAGAAAATTGAGATGGAGAAGAACAAGCAAGATGACGCCCTCGATGATTTGAGTAATATCTTGGGTGACTTAAAGGGGATAGCAGTTGACATGGGAACTGAACTCGACAGGCAAAATAAAGCTCTTGATCATCTTAGTGATGATGTGGATGAACTGAATTCTCGGGTTAAAGGTGCCAACCAACGTGCTCGCAAACTGCTAGCTGGTTAG 879 0.4403 MFGFMKAAPKEENPAGTVSSTPETTLKPERRTTSEPVPAPKSKGNYFDDDDDDDWGRGRKASATSSSTSAAAKNRYNNDFKDSGSLENQSVQELENYAVYKSEETTKDVNNCLRIAEDIRGDATKTLDMLHQQGEQIHRTHNMIVETEKDLSRGEKLLNNLGGMFSMPWRPKKTKEIKGPVITPDKPSKTNENKHKEEREKLGLNDDKGKAASKITSEPADAYQKIEMEKNKQDDALDDLSNILGDLKGIAVDMGTELDRQNKALDHLSDDVDELNSRVKGANQRARKLLAG 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1470 292 FunFam SNAP25 homologous protein SNAP33 85 162 - -
Lele51g1470 292 SUPERFAMILY SNARE fusion complex 222 290 - -
Lele51g1470 292 Gene3D - 224 290 - -
Lele51g1470 292 Coils Coil 258 285 - -
Lele51g1470 292 MobiDBLite consensus disorder prediction 60 84 - -
Lele51g1470 292 Gene3D - 84 163 - -
Lele51g1470 292 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 61 290 - -
Lele51g1470 292 SMART tSNARE_6 94 161 IPR000727 -
Lele51g1470 292 SMART tSNARE_6 222 289 IPR000727 -
Lele51g1470 292 CDD SNARE_SNAP25N_23N_29N_SEC9N 96 160 IPR044766 GO:0005484|GO:0031201
Lele51g1470 292 FunFam SNAP25 homologous protein SNAP33 224 291 - -
Lele51g1470 292 MobiDBLite consensus disorder prediction 1 84 - -
Lele51g1470 292 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 227 289 IPR000727 -
Lele51g1470 292 MobiDBLite consensus disorder prediction 44 59 - -
Lele51g1470 292 MobiDBLite consensus disorder prediction 177 214 - -
Lele51g1470 292 MobiDBLite consensus disorder prediction 177 220 - -
Lele51g1470 292 CDD SNARE_Qc 230 288 - -
Lele51g1470 292 SUPERFAMILY SNARE fusion complex 89 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1470 Lele-ChrLele51 10703816 10706789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1470 216 287 SNARE and Associated Proteins AT3G09740 38.889 9.16e-06 44.3