Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1442 ATGGATCAGGGCACTTTCTCTGCCCGAAGCCGGAAAGCCAGACCCAAGTCTGACCTGTATTCCACCGTCGTCGTGCACGACGGCGACGACGACGAAGACAAGAAAAGCCGTAGCGGACGGAATGCTATAGGCTCGGGGCCCGAGGACGATCCATATGCGACGATGGTCTACAAAGACAATGGCCATGAAGACGAAGATGATGACGACTCCTCCCTCCCTCCTCTTCTCAAGCGCCTGCCCAAAGACTTCGGTGGTGGAGCCTCGATGGACTACGAAGACGATCCTGACGATGATGTGGGCGATTTTGGCACCATGATCGTTAAGACCGATCGAGGTCGGGAGCGAAATCGGTCTTCTTCGTCGTCCATGGGTTCGACATGGAAGTCTCGGAAGTCTCCTATGAGGCAGGCAAGTCCAATGACGGGACTGGGTGATGGGGATGATGAAGATGATGACGGTGACGGGGGGTTTTCAACTTTCGTCGTACGTAAAACGGCTAGGTCCAGTGAGAGAGAGTCGGTCAGTGGAACCGTGGTGCGTAGGACAAGTGGCGGTGCAGGTGGTGGCGGAAGTGGTACTGGCTCGACAATGGAAAGAGCGGTGGCGAGTATGCAGGCATCGGGTGAACTGGGCTTTGGGAAACAGAGGAGGGGAAGCGGGCCCTTGCAGAACGACGAGGGTAGGCAATCAATAGGGACGAAGGTTTCATCGAGTTCGATACCGGAAAGCGTCACTAGAGAGGATCCTACAACTAAGTACGAATTGCTCAATGAACTTGGGAAGGGATCTTACGGGTCTGTTTACAAAGCTAGGGATTTAAAGACTTCCGAGCTTGTCGCTATCAAAGTCATTTCCCTTTCTGAAGGGGAGGAGGGATACGAGGAAATCCGTGGTGAAATTGAGATGTTGCAGCAGTGTAATCATCCAAACGTGGTCCGCTACCTTGGAAGCTATCAGGGAGAAGAGTATCTTTGGATAGTTATGGAATACTGTGGCGGTGGTAGTGTTGCTGACCTGATGAATGTGACTGACGAGCCACTGGATGAGGGTCAGATAGCATATATCTGTAGAGAAGCACTGAAGGGACTTGAGTATTTGCACTCCATTTTCAAAGTCCATAGGGACATTAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCGCAGCTTACCAGGACCATGTCAAAGCGAAACACGTTCATTGGAACACCTCATTGGATGGCTCCGGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTAGACGTGTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCAGAGGGCCTTCCTCCAAGATCAGCTGTCCATCCAATGAGGGTTTTGTTCATGATATCCATTGAACCAGCACCAATGCTTGAGGATAAAGAAAAATGGTCTCTACATTTTCACGACTTTGTTGCTAAGTGCCTGACTAAGGAACCTCGTTTACGCCCTACTGCATCAGAGATGTTAAAGCACAAATTCTTTGACAAATGGAAAACTGGATCAACAGCAATGATGCCAAAAATTGAAAAGGCTAGGCAAATCAGGAAATCGATGGCCTTGCAAGCACAAAGTGTTGCTCCAGCTGCATTAGAAGATCAGTCAAATGAGCAAAAACTGAATGACGACTATGGAGACACTGTTCCGTCAAGACCTCTTAACATTGGGGTTCAAGGGGCAGGTGGTCTTTCTTCAGATGGAACTCTGAGGACGCTGAATAGGTTGGAAAGTGTGGAACTGAGTGAAGGTAACTTTGGCACCGTAGTAGTCCATGGAGATGAGGTTGATACAGCAGCAGCGAGGTCACAGGGTGCAGATAATGCAGATTCCTCTGCTTCCTTCATTAGTGGAACAAGAGGCAGATTGGCTGATTCTAGGGTGGAGAGTCTGGAAGTTGCTGTCTCAAGTGATGCCTCTGTTGGGGGTTTGGGTGCTCATACTAATACAATAAAATCATCTTTATCTCCTATTAATGACTCGGCTGAACTGAAACACAAAATAACAGGTGATTTTCAAGCAACAGTTGGAGCCAGCAGTGATAGAAGGAACGGTACATTGAAGAATGAAACAGTCAGCAGAAAAGCATTTGCTTTACAGGATAAGCTTTGGTCAATTTATGCAGCCGGTAATACAGTACCCATTCCATTCTTAAGGGCAACAGATATTTCACCTATTGCTCTCCTATCGGACAATGTGCTTGGTGGCATGCAGCAAGATTCCACTGGAACTGCTACAGTAGAAGCATTGCACGAGCTTTTTAGTGGTGATGGACAGTCGAAAAGGGGACGCAGAGGACAAATTGAGATGCCTGTTCCTCCAAGCATTTACCAGAGACTGACATCGAGTTCTACTCTGCTGAATTTGGCCCAGGCTCTAGCTTACCACAAAATGTGTTATGAAGATATGCCGCTGCAGGACCTGCAGGCAACCCAAGAGCAGCAGACCATCCAAAACCTCTGTGACACTCTTCGTACTATTCTTCGCTTTCACAGTGGTTTCTTCTATTTTGCTTGGCAGAAGGAGCTTTTCTACCATTTGCAGATAAACAATACTCAGCAGCCTGCATTGGCAATTGGTTCAAGAACATCACTTGGTTCATTGGCCTTGGATTCATGA 2652 0.4793 MDQGTFSARSRKARPKSDLYSTVVVHDGDDDEDKKSRSGRNAIGSGPEDDPYATMVYKDNGHEDEDDDDSSLPPLLKRLPKDFGGGASMDYEDDPDDDVGDFGTMIVKTDRGRERNRSSSSSMGSTWKSRKSPMRQASPMTGLGDGDDEDDDGDGGFSTFVVRKTARSSERESVSGTVVRRTSGGAGGGGSGTGSTMERAVASMQASGELGFGKQRRGSGPLQNDEGRQSIGTKVSSSSIPESVTREDPTTKYELLNELGKGSYGSVYKARDLKTSELVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDEPLDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLHFHDFVAKCLTKEPRLRPTASEMLKHKFFDKWKTGSTAMMPKIEKARQIRKSMALQAQSVAPAALEDQSNEQKLNDDYGDTVPSRPLNIGVQGAGGLSSDGTLRTLNRLESVELSEGNFGTVVVHGDEVDTAAARSQGADNADSSASFISGTRGRLADSRVESLEVAVSSDASVGGLGAHTNTIKSSLSPINDSAELKHKITGDFQATVGASSDRRNGTLKNETVSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQDSTGTATVEALHELFSGDGQSKRGRRGQIEMPVPPSIYQRLTSSSTLLNLAQALAYHKMCYEDMPLQDLQATQEQQTIQNLCDTLRTILRFHSGFFYFAWQKELFYHLQINNTQQPALAIGSRTSLGSLALDS 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1442 883 MobiDBLite consensus disorder prediction 118 136 - -
Lele51g1442 883 ProSitePatterns Protein kinases ATP-binding region signature. 259 282 IPR017441 GO:0005524
Lele51g1442 883 MobiDBLite consensus disorder prediction 101 117 - -
Lele51g1442 883 MobiDBLite consensus disorder prediction 222 246 - -
Lele51g1442 883 MobiDBLite consensus disorder prediction 1 196 - -
Lele51g1442 883 FunFam serine/threonine-protein kinase dst1 isoform X1 250 541 - -
Lele51g1442 883 SUPERFAMILY Protein kinase-like (PK-like) 250 508 IPR011009 -
Lele51g1442 883 FunFam Aurora kinase A 245 334 - -
Lele51g1442 883 MobiDBLite consensus disorder prediction 208 249 - -
Lele51g1442 883 Gene3D Transferase(Phosphotransferase) domain 1 249 547 - -
Lele51g1442 883 ProSiteProfiles Protein kinase domain profile. 253 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1442 883 SMART serkin_6 253 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1442 883 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 236 546 - -
Lele51g1442 883 MobiDBLite consensus disorder prediction 23 39 - -
Lele51g1442 883 Pfam Protein kinase domain 253 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g1442 883 CDD STKc_MAP4K3_like 252 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1442 Lele-ChrLele51 10383554 10396605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1442 7 841 MAP Kinase Kinase Kinase Kinase AT1G69220 60.487 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Lele51g1442 Pkinase 1.7e-69 CL0016