Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1434 ATGCAGGTACGGTGGAGGGGACATTTGCTTATTGAAACTCCCATGGCTCCCAATGCAACCCCCAATTCAAGAGTTGCCAAGGCCTTCAGTGCTATGAGGGACTTAGGAATTTCTTGTGATGAAGTAAAACCAGTGTTGCAAAAGCTGTTAAGATTGTATGATAAGAAATGGGAATATATTGAAGAAGATAACTATCGAACGCTTGTAGATGCATACTTTGAGCTTAAGGAAGATAAGGAAGCAGAAGGTAAGAGAAAAGCTCTCATCAGTCATCATGGTGGAGAAAGACAAACTCTATCATTGGTAGATGAAGATGATGTGCTTTTGTTAACCACCAACAACTCAAGACAAATATTATCTGCAGAAGAGAATGAAACGCCTCGAAATACTTTTGGACGGGAAATCATTGAATCATCTCAACTTTTGACGGGCCATATGAGACCTAAAATCTTTCCTCAATCATTGAAAGCAAGAATTAGTGAGGTAGAAAGGATATCAAAGTTGACTGGCATGGCAGCTATAGATAGAAAATCAAATTCTGAGCAAGAATCTTCTGCAAGGCATGGGGAAGAACCTGTTGTTAATCCAAGCTCTGCTCCTACTCGAAGAGAAAATCTACCAAATGGACATTGTAGGAAGGAGATAATGAAGCCAGAAACTCGACACAATAAATTACATCTTGGATCCAGTTCAACAAGTTGCAGAGGTCCATATGAGGTTTTGACTAGAAATCATCCTGTCAAGTCGGTGCCTTCTCTGTATCTGGATGTGAACAGTGTCATTTACGATTCTGCACATAATAACAACCCCACAAGCAGAAAGGCTAATAACATTGACATTGCCTCTTCACCATTGGGAGAAGTGAAAATTTCCTTAAACTGTGACCAAGCACTTGGACGGCCAAACTTCAATATTCCAAACTTAAATGCTGTTATGAAGTTCGTGGAGGAGAAGTACCTTAAGCCTAGCAATATTGTTGGACCTAAATTTTCTATGGTGAGTTTATTAAACGGTTTGTGTGAGAGTTTCCTTAAATTGGGCATGAATATGAATCAAAAGAGTTCACATCCTGAGTTTAACAATGCAAATAGATTAACAAATGGCCCACAACAAGCTGTTGCTCAAGATGAGGGGAAACTATTTCAGTTTCTTAATGACATAACAAAAGGCTCAGAAAAGGTGAAGATATCGTTGATAGATGAGTATGGTATTGGGGAATTGCCAAAGTTTAATTACATGCCACATAATCTAATATATCAGAGTGCTAATGTAAATATTTCACTAGCTCGTGTTGCGGATGAAGATTGTTGCTCAAATTGTTTAGGAGACTGTCTTTCTCAAGCATTACCTTGTGCATGTGCTCAAGAAACTGGTGGAGAGTTTGCTTACACACTGGAGGGCTTGTTGAAAGATGAATTTCTAACATCTTGCATGTTAATGAAAAAGGAACCTCAAGCTCATCAATTGGTGTACTGTCAAGAGTGCCCAATGGAGAGGTCCAAGAATGAATTCTTGCCTGAGAAATGTAAGGGGCACCTGATCAGGAAGTTCATTAAGGAATGTTGGAGGAAATGTGGATGTGACATGCAGTGTGGAAATCGTATAGTGTTCTTTTACGGTGAAGGAAAGGGCTGGGGCCTTAGAACACTAGAAGATTTGCCTAGGGGATCCTTTATATGTGAATATGTGGGCGAAATATTAACCAACATGGAGTTGTATGAAAGAATTGTGCACAAAAATGGCAATGATAGACATACATATCCTGTAACCCTTGATGCAGACTGGGGCTCAGAAGGGGTGTTAAAGGATGAAGAGGCCCTGTGTTTAGATGCAACATATAATGGAAATGTTGCCAGGTTTATCAATCATAGATGCTCAGATGCTAATCTGATCGATATTCCCGTTGAAGTGGAGACTCCCGATCGCCATTATTATCATCTTGCCTTCTTCACTAACAATAAAGTGAGAGCTTATGAGGAGTTGACGTGGGATTATGGTATTGACTTTGATGATCATGATCACCCTATCAAAGCATTCCAATGTTGTTGTGGGAGCACATTCTGCCGCGATAGGAACCGGAAAGGGAAGCGAAAATTACGAAACGTGGGTGAGGCGAGAGGAAAGTCTAAACCAATGAAGCTCCCTACTTCAACCATTATTGCAACTGCTGCACACAAACAACGTTCTTGA 2190 0.4023 MQVRWRGHLLIETPMAPNATPNSRVAKAFSAMRDLGISCDEVKPVLQKLLRLYDKKWEYIEEDNYRTLVDAYFELKEDKEAEGKRKALISHHGGERQTLSLVDEDDVLLLTTNNSRQILSAEENETPRNTFGREIIESSQLLTGHMRPKIFPQSLKARISEVERISKLTGMAAIDRKSNSEQESSARHGEEPVVNPSSAPTRRENLPNGHCRKEIMKPETRHNKLHLGSSSTSCRGPYEVLTRNHPVKSVPSLYLDVNSVIYDSAHNNNPTSRKANNIDIASSPLGEVKISLNCDQALGRPNFNIPNLNAVMKFVEEKYLKPSNIVGPKFSMVSLLNGLCESFLKLGMNMNQKSSHPEFNNANRLTNGPQQAVAQDEGKLFQFLNDITKGSEKVKISLIDEYGIGELPKFNYMPHNLIYQSANVNISLARVADEDCCSNCLGDCLSQALPCACAQETGGEFAYTLEGLLKDEFLTSCMLMKKEPQAHQLVYCQECPMERSKNEFLPEKCKGHLIRKFIKECWRKCGCDMQCGNRIVFFYGEGKGWGLRTLEDLPRGSFICEYVGEILTNMELYERIVHKNGNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVARFINHRCSDANLIDIPVEVETPDRHYYHLAFFTNNKVRAYEELTWDYGIDFDDHDHPIKAFQCCCGSTFCRDRNRKGKRKLRNVGEARGKSKPMKLPTSTIIATAAHKQRS 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1434 729 MobiDBLite consensus disorder prediction 173 219 - -
Lele51g1434 729 FunFam SET-domain containing protein lysine methyltransferase family protein 387 691 - -
Lele51g1434 729 SMART set_7 533 672 IPR001214 GO:0005515
Lele51g1434 729 Pfam Pre-SET motif 387 534 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele51g1434 729 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 728 IPR025776 -
Lele51g1434 729 SUPERFAMILY SET domain 403 689 IPR046341 -
Lele51g1434 729 Gene3D SET domain 387 691 IPR046341 -
Lele51g1434 729 Gene3D - 12 78 IPR043017 -
Lele51g1434 729 Pfam Ubiquitin-binding WIYLD domain 22 77 IPR018848 GO:0018024
Lele51g1434 729 CDD SET_SETDB-like 408 666 - -
Lele51g1434 729 ProSiteProfiles SET domain profile. 533 666 IPR001214 GO:0005515
Lele51g1434 729 SMART preset_2 384 526 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele51g1434 729 Pfam SET domain 544 666 IPR001214 GO:0005515
Lele51g1434 729 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 15 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1434 Lele-ChrLele51 10317060 10321370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1434 518 689 C2H2 Transcription Factor Family AT2G23740 37.097 2.47e-26 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele51g1434 Pre-SET 1e-15 No_clan