Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1427 ATGGAATCTTGGAGTTATCTCTCAGAAGAGAAAGGCTATTTGATTTCTGATGAGATGGATTTTTCACTCGAAGCTTTTATGAGAGGCAAAAAGGGCAAAGATTCTTGTAACTTGGAGAGAGATGAATTCGGTTCTAGTGGGGGGGAAGCTAAAAGCATGGAAGTTTTTGACCTGGGATTTCATGACTTGTTTCAAAATGAGCTAGATAGAAATCATAGTAAAAGAGCGACTTCCTCTATCAATGTTATTGCCATGGATTCATCTTCTGCAGAATCTCAGCCAATGTTTTTAGGTTCTCTAGTTGAATCTAAAAGTCCCGATTCATCACTGATTGATTTGAAGCTTGGGAGAATAGCTGATTGTAAAGATGCAAATACTGATAAAATTGCAAGGAGAGCTCGGTCTTCCGGCTCACCAACTCAGACGGTTTTTTGTCAAGTTTATGGTTGTAACATGGATCTTAGCTCCTCAAAGGAGTACCACAAAAGGCATAGAGTTTGTGATGCTCACTCCAAGACAGCCAAAGTTATTGTTAATGGCATTGAGCAGAGGTTTTGTCAGCAGTGTAGCAGGTTCCATTTGCTAGCCGAGTTCGATGATGGCAAGCGCAGTTGTCGCAGACGTCTAGCTGGACACAATCAACGCAGAAGGAAGCCTCAGTTTGATTACTTATCTGGTAAACCCTACAAGATGCTCCAGTTACATCAAGGGACCAAATATCTGGAGTCTTCATTTCAGAAGAGACCCCAGTTTGCCTCACAAGACGTGATCAGTTGTGGCACTTTGTATGAACAAACCAGCATCACACGCAGTCAGGAGGAGTTGTCGACAGCCTCAAATGCGAGCTGTGCTCTCTCTCTTCTGTCAGTTCACTCGCAGAACCCGCCATGCCGCCCAGCTGGAAACCCGGGACCTAGTTCCCATGCTTGTCGTGCTGATGAAAATGTTTCCAAAATACATTTGGGCAAAAACCCTGTGGACATGCATGAGCAAAATGAGTCGTCATCATCTCATGGATTGAGCTCCATGGAAGCTATCAAGAATAGATCCATATTGCTTTCTAATGCTGATTGTGCTCATCATCTTCAGGTTTGCCAAAGATCAGAATTATCGGATGCCAAACACTATGTTTCAGCTGAGGATGGTGCCACTGTTGATCTTCTGCAATTGTCTTCACATCTTCAAAGGGTGGAGCATCAGAGGAATTCATTTCTTCAGGGAGGCCATTGA 1230 0.435 MESWSYLSEEKGYLISDEMDFSLEAFMRGKKGKDSCNLERDEFGSSGGEAKSMEVFDLGFHDLFQNELDRNHSKRATSSINVIAMDSSSAESQPMFLGSLVESKSPDSSLIDLKLGRIADCKDANTDKIARRARSSGSPTQTVFCQVYGCNMDLSSSKEYHKRHRVCDAHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNQRRRKPQFDYLSGKPYKMLQLHQGTKYLESSFQKRPQFASQDVISCGTLYEQTSITRSQEELSTASNASCALSLLSVHSQNPPCRPAGNPGPSSHACRADENVSKIHLGKNPVDMHEQNESSSSHGLSSMEAIKNRSILLSNADCAHHLQVCQRSELSDAKHYVSAEDGATVDLLQLSSHLQRVEHQRNSFLQGGH 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1427 409 SUPERFAMILY SBT domain 143 224 IPR036893 GO:0003677|GO:0005634
Lele51g1427 409 Gene3D - 135 206 IPR036893 GO:0003677|GO:0005634
Lele51g1427 409 Pfam SBP domain 145 218 IPR004333 GO:0003677
Lele51g1427 409 ProSiteProfiles Zinc finger SBP-type profile. 142 219 IPR004333 GO:0003677
Lele51g1427 409 FunFam Squamosa promoter-binding-like protein 14 136 206 - -
Lele51g1427 409 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 100 357 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1427 Lele-ChrLele51 10209474 10215019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1427 111 402 SBP-box Gene Family AT1G69170 40.923 5.03e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele51g1427 SBP 2.1e-31 No_clan