Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1394 ATGGCTCAAGATACCTCCAGCACAGATTCAAATTATAAGCGCCAAGGTCTCTTGAAAGATCAAGTTCGTTTGGTTAGAAGGAAAGACTCTGATCGCTATGAGATTGTCCCAATCGACGATCTTCTATCCTTTGACAAGGGTTTTTTTATAGTAATCCGTGCTTGCCAACTGTTAGCCCAGAAAAATGATGGAATGATATTGGTAGGTTTAGCTGGCCCTTCAGGGGCTGGTAAGACTATATTTACAGAAAAAATACTCAACTTCATGCCTGGCATTGCAGTCATTTCAATGGACAACTACAATGATTCCAGTCGAATTGTTGATGGGAACTTTGATGATCCACGCTTAACGGACTATGACACGTTGCTCCAGAATGTCCGCGATTTGAAGGCAGGAAAATCAGTTGAGGTTCCAATCTATGATTTTAAGTCCAGTTCACGCACAGGGTACAGGACAGTTGAAGTCCCCAGCTCCCGCATTGTGATCATAGAGGGAATCTATGCATTGAGTGAGAAGTTGCGGCCCCTACTGGACCTTCGAGTATCCGTCACGGGTGGAGTTCACTTGGACCTTGTCAAACGAGTTATTCGTGACATACAACGTGCTGGCCAAGAACCTGAAGAAATTATTCATCAAATATCCGAGACGGTATACCCAATGTACAAGGCCTTTATTGAACCAGATCTTCAGACAGCACATATCAAAATAATCAACAAGTTCAATCCATTTACTGGTTTTCAAAGTCCTACCTACATATTAAAGTCAGCAAGGAAAGTAACAGTTGATGAAATCAAAGCTGTTCTCTCTGAAGATTATAAGGAAACAACGGAGAAGACTTATGACATATATCTTCTACCTCCTGGTGAAGATCCAGAAACTTGCCAATCATACCTACGGATGCGGAATAAGGATGGGAAATACTGTCTCATGTTTGAGGAATGGGTAACAGATAATCCTTTTGTTATATCACCAAGAATTACTTTTGAAGTAAGTGTGCGCCTTCTTGGTGGACTTATGGCCTTGGGATACACTATCGCTACCATCCTTAAAAGAGACAGCCATGTACTCTCTGATGATAGGATTTGTGTGAAACTTGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTGCATGGAAGAGATCGCATGGTTGTGAAATATGTAGGAGAGCAGCTGGGTCTGGATGGCTCTTACATTCCTCGTACCTACATTGAACAAATTCAACTTGAAAAGCTTGTAAATGAAGTTATGGCCTTGCCGGATGATTTGAAGACAAAGCTTAGCCTAAATGAGGATTTGGTGTCGAGCCCCAAAGAAGCACTTTCTCAAGCCTCTGCGGACAGGGTCGCCATGAGAAATAAGCATATCAGAAGCTTTTCACAATCATATACAAATCAAAGGGACAAGAATCTAGCCAAACTTGCAATATATGCTTCCAAGAATCGTGGGTTTAGTGAAAGTACTCTGGAGTTGCCAACAGCACCATCAAACCAGGTAAACATCACTCAGCTTTCCGAATTAATCTCCTCTCTTAATGATAGAATGGACGAATTTACAAATCGTATTGAGGAGTTGAACTCAAAGGTAGCTACCAAGAAAAATTCTCTCAGCCAACAAAATATGTCCCTCCAACCTGAAGCCTGCAATGGTTCTGCTCCTACCTCTTACTTCCTCACTAGCCTAGGAAATGGCTCCTTAACTGGATCCATTATGCCAAATTCCTCATCTTCATTACAGTCAGCCAAAGAATCACCTTTAATTAAAGAGTTATCAGGTATTGCAAGGAGCCAGCGCCAGATGATACACCAACTGGACAATCTGAATAATCTTCTTCAGGAAAACATAGCAAACAAGTGTAGCCAAACAAGAACCTGCAACAGAACCATGGCTGATACTGAATCAGAGTCCAGTGGTGTGCGTGTTATGGTGACTGTGGCTATTGGGGTTTTGGGGATCTTCTTGATGAAGGGTTTGTTGAAGAGAAATTGA 1992 0.4187 MAQDTSSTDSNYKRQGLLKDQVRLVRRKDSDRYEIVPIDDLLSFDKGFFIVIRACQLLAQKNDGMILVGLAGPSGAGKTIFTEKILNFMPGIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNVRDLKAGKSVEVPIYDFKSSSRTGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSARKVTVDEIKAVLSEDYKETTEKTYDIYLLPPGEDPETCQSYLRMRNKDGKYCLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRDSHVLSDDRICVKLDWLEQLNRHYVQVHGRDRMVVKYVGEQLGLDGSYIPRTYIEQIQLEKLVNEVMALPDDLKTKLSLNEDLVSSPKEALSQASADRVAMRNKHIRSFSQSYTNQRDKNLAKLAIYASKNRGFSESTLELPTAPSNQVNITQLSELISSLNDRMDEFTNRIEELNSKVATKKNSLSQQNMSLQPEACNGSAPTSYFLTSLGNGSLTGSIMPNSSSSLQSAKESPLIKELSGIARSQRQMIHQLDNLNNLLQENIANKCSQTRTCNRTMADTESESSGVRVMVTVAIGVLGIFLMKGLLKRN 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1394 663 CDD UMPK_like 67 239 - -
Lele51g1394 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 236 IPR027417 -
Lele51g1394 663 PRINTS Uridine kinase signature 132 147 - -
Lele51g1394 663 PRINTS Uridine kinase signature 188 198 - -
Lele51g1394 663 PRINTS Uridine kinase signature 65 82 - -
Lele51g1394 663 PRINTS Uridine kinase signature 224 237 - -
Lele51g1394 663 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Lele51g1394 663 Coils Coil 502 536 - -
Lele51g1394 663 SUPERFAMILY CYTH-like phosphatases 261 407 IPR033469 -
Lele51g1394 663 Pfam CYTH domain 267 404 IPR023577 -
Lele51g1394 663 ProSiteProfiles CYTH domain profile. 252 410 IPR023577 -
Lele51g1394 663 Gene3D - 65 266 IPR027417 -
Lele51g1394 663 PANTHER URIDINE KINASE 32 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1394 Lele-ChrLele51 9760109 9767073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1394 53 236 PRT Gene Family AT1G55810 27.835 7.98e-17 81.6